Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 SNORA36C-201ENST00000384289 132 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 RNU6-196P-201ENST00000384315 107 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.482-201ENST00000384377 111 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 RNU6-1127P-201ENST00000384580 107 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 RNU6-1106P-201ENST00000390845 107 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 SAR1AP2-201ENST00000392696 594 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 RNU6-954P-201ENST00000411355 107 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL139396.1-201ENST00000421137 167 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 TXNP1-201ENST00000441872 371 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 MIR2053-201ENST00000459295 91 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL135752.1-201ENST00000479477 471 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC108860.1-201ENST00000484521 383 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 RNU6-1213P-201ENST00000517075 94 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 MIR4503-201ENST00000582187 83 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 MIR4435-1-201ENST00000582552 80 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 ELOCP29-201ENST00000588193 334 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC006006.1-201ENST00000603082 144 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL133393.1-201ENST00000603277 287 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AL589994.2-201ENST00000621124 579 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 CUL1P1-201ENST00000509510 2425 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC103710.2-202ENST00000641454 2853 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNU6-601P-201ENST00000384540 107 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNU6-310P-201ENST00000384655 107 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNA5SP219-201ENST00000390940 113 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 NDUFS5P1-201ENST00000405668 289 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC008264.1-201ENST00000447612 367 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 HMGB3P8-201ENST00000449709 577 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 SNORA31.1-201ENST00000515993 133 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNU6-189P-201ENST00000516120 101 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 SNORA31.5-201ENST00000516190 133 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNA5SP367-201ENST00000516557 118 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RNU6-685P-201ENST00000517088 95 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 RN7SKP295-201ENST00000517264 153 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 COX6CP5-201ENST00000527162 228 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC011602.1-201ENST00000546484 331 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC012409.4-201ENST00000612923 249 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 SDR42E1P2-201ENST00000614861 481 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AC098657.3-201ENST00000620434 263 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C4orf47A7E2U8 AL137003.2-201ENST00000606924 2538 ntBASIC3.11□□□□□ -1.91
C4orf47A7E2U8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL513302.2-201ENST00000562313 1842 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.5-201ENST00000362334 102 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.135-201ENST00000363439 95 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RNU6-946P-201ENST00000383878 107 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RNU6-331P-201ENST00000384724 107 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 MIR450B-201ENST00000401182 78 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.646-201ENST00000410980 101 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RPS12P24-201ENST00000412619 387 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 BX682237.1-201ENST00000415016 335 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL160004.2-201ENST00000432935 350 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RNA5SP310-201ENST00000459084 116 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 DYNLL1P5-201ENST00000467158 270 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 TRBV1-201ENST00000476502 284 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms