Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CYP3A52P-201ENST00000563326 91 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC027335.2-201ENST00000624030 375 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 GDI2P1-201ENST00000429312 1336 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 SNORD1A-201ENST00000364968 72 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC069282.1-201ENST00000411911 526 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.27□□□□□ -2.37
CNOT1A5YKK6 BEND7P1-201ENST00000422058 457 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 RPS26P55-201ENST00000471178 356 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 CYCTP-201ENST00000504253 315 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.27□□□□□ -2.37
CNOT1A5YKK6 RNU6-1004P-201ENST00000516584 111 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.27□□□□□ -2.37
CNOT1A5YKK6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CNOT1A5YKK6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU6-339P-201ENST00000384310 107 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RPS3AP36-201ENST00000398190 775 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 AC007742.1-201ENST00000425789 329 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.26□□□□□ -2.37
CNOT1A5YKK6 ELOCP26-201ENST00000436067 329 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 AL049734.2-201ENST00000441066 616 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU6-491P-201ENST00000516099 110 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 AC090142.3-201ENST00000519012 385 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 AC125611.1-201ENST00000549563 229 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CNOT1A5YKK6 SNORD115-3-201ENST00000363100 82 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU6-414P-201ENST00000363705 104 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU6-968P-201ENST00000384076 107 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU6-45P-201ENST00000384471 107 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MIR218-1-201ENST00000384999 110 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MIR95-201ENST00000385072 81 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MIR1283-2-201ENST00000408621 87 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU2-64P-201ENST00000411315 191 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.26□□□□□ -2.37
CNOT1A5YKK6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.26□□□□□ -2.37
CNOT1A5YKK6 RNU6-889P-201ENST00000517189 103 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 AC136628.3-201ENST00000521868 290 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 CR383656.7-201ENST00000548164 174 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MIR548AX-201ENST00000580117 73 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MIR4768-201ENST00000585270 74 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 U1.36-201ENST00000620684 176 ntBASIC0.26□□□□□ -2.37
CNOT1A5YKK6 MTND4P8-201ENST00000514997 1362 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 SNORD33-201ENST00000362761 85 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 SNORD3E-201ENST00000362899 217 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 SNORD114-3-201ENST00000364969 75 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 Y_RNA.413-201ENST00000384007 102 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 MTCO3P5-201ENST00000433620 714 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 MTCO1P44-201ENST00000441935 243 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 MTND5P8-201ENST00000449817 1083 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 Y_RNA.754-201ENST00000476024 102 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AL163195.1-201ENST00000496941 348 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AC012669.1-201ENST00000603209 283 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 Y_RNA.790-201ENST00000614282 102 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 Y_RNA.782-201ENST00000614695 102 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AC092125.1-201ENST00000562568 1995 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 RNU6-833P-201ENST00000363486 107 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 DSTNP4-201ENST00000399472 474 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
CNOT1A5YKK6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.25□□□□□ -2.37
CNOT1A5YKK6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.24□□□□□ -2.37
CNOT1A5YKK6 SNORD51-201ENST00000384320 80 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 RNA5SP118-201ENST00000410385 109 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AC097463.2-201ENST00000421074 142 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AC092634.2-201ENST00000428146 1010 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.24□□□□□ -2.37
CNOT1A5YKK6 snoU13.9-201ENST00000458927 103 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 BBIP1P1-201ENST00000602999 279 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AP000811.1-201ENST00000603803 651 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AL160275.3-201ENST00000423876 471 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 RPEP5-201ENST00000441137 268 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AC009268.1-201ENST00000561352 1203 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AC233702.2-202ENST00000562547 291 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AC021171.1-201ENST00000603137 706 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AL713866.2-201ENST00000603579 219 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 AP003072.5-201ENST00000623872 773 ntBASIC0.24□□□□□ -2.37
CNOT1A5YKK6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 Y_RNA.255-201ENST00000364581 97 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 MIR224-201ENST00000384889 81 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 CCNG1P1-201ENST00000406783 885 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 VPS26BP1-201ENST00000417155 755 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.23□□□□□ -2.37
CNOT1A5YKK6 MRPS17P3-201ENST00000465453 385 ntBASIC0.23□□□□□ -2.37
CNOT1A5YKK6 RNY1P9-201ENST00000532431 109 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms