Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 ZNF137P-201ENST00000456718 1920 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RNA5SP123-201ENST00000363244 119 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RNU6-626P-201ENST00000363354 107 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 SNORA37-201ENST00000384504 129 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 MIR544A-201ENST00000384855 91 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 U3.19-201ENST00000390893 196 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 FTH1P15-201ENST00000406984 280 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RNU2-61P-201ENST00000411069 191 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 COX6CP10-201ENST00000416832 224 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 AC005154.2-201ENST00000438110 379 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 AC007395.1-201ENST00000451333 677 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 AC006517.1-201ENST00000480485 328 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RPS4XP22-201ENST00000480755 780 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RPL7P47-201ENST00000497299 556 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.683-201ENST00000516508 93 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 RNA5SP54-201ENST00000516951 92 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 AC087441.2-201ENST00000529141 262 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 MIR4700-201ENST00000578311 74 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 AC010620.2-201ENST00000600135 313 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 MIR3529-201ENST00000637713 78 ntBASIC3.8□□□□□ -1.8
SHISA3A0PJX4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA3A0PJX4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 MIR410-201ENST00000362222 80 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNA5SP167-201ENST00000365461 116 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNU6-20P-201ENST00000384106 107 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNU6-187P-201ENST00000384139 106 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNA5SP129-201ENST00000410276 118 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RPL37P18-201ENST00000411602 243 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 COX6B1P1-201ENST00000415962 213 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RPS12P10-201ENST00000427031 377 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 COX6B1P7-201ENST00000430845 235 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 PSMD10P3-201ENST00000437000 448 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AC084357.1-201ENST00000473404 255 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RPS27AP10-201ENST00000496103 208 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RN7SKP122-201ENST00000515923 296 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 RNA5SP497-201ENST00000516081 97 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 SNORA31.23-201ENST00000517219 133 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AP004242.1-201ENST00000533701 349 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 UBL5P4-201ENST00000562584 236 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AL451007.1-201ENST00000595491 289 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AC100827.5-201ENST00000615883 426 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 MIR6853-201ENST00000619642 74 ntBASIC3.79□□□□□ -1.8
SHISA3A0PJX4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
SHISA3A0PJX4 AC010300.1-201ENST00000600671 5134 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 AL079305.1-201ENST00000623159 3008 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 RNU6-858P-201ENST00000362436 107 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 RNU6-125P-201ENST00000384505 107 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 MIR585-201ENST00000384887 94 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 SNORA26.3-201ENST00000391119 136 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 HLFP1-201ENST00000402375 499 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 RNA5SP113-201ENST00000410486 84 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 AC016831.4-201ENST00000438302 307 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 NIP7P2-201ENST00000485801 544 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 IGLV2-34-201ENST00000490007 283 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 SNORA40.9-201ENST00000515895 93 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 SNORD116-28-201ENST00000516123 91 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms