Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 Y_RNA.772-201ENST00000606692 102 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL136964.1-201ENST00000622038 2990 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU5A-1-201ENST00000362698 116 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU6-1159P-201ENST00000362933 107 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU1-33P-201ENST00000364249 162 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.291-201ENST00000364886 113 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNY3P4-201ENST00000384428 101 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.506-201ENST00000384494 102 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR153-1-201ENST00000384914 90 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL117339.3-201ENST00000418733 162 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL591043.1-201ENST00000432461 424 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 BX679664.1-201ENST00000434429 253 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR2355-201ENST00000517199 87 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC084851.1-201ENST00000529105 249 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC104581.2-201ENST00000572227 430 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC002545.1-201ENST00000592511 181 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL591424.2-201ENST00000617023 128 ntBASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.79□□□□□ -1.64
LOC102724428A0A0B4J2F2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU6-1074P-201ENST00000383995 104 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 SNORA48.2-201ENST00000390926 124 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU2-20P-201ENST00000410425 191 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.602-201ENST00000410535 92 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 NDUFB4P10-201ENST00000452541 359 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AK3P2-201ENST00000507976 429 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AP002392.1-201ENST00000537692 208 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL137849.1-201ENST00000604767 169 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR8058-201ENST00000615737 89 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL360181.4-201ENST00000621752 134 ntBASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 RNA5SP120-201ENST00000410900 112 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 RBMY2UP-201ENST00000453474 324 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC010186.2-204ENST00000537668 439 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC107016.1-201ENST00000550463 337 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC073657.2-201ENST00000605661 303 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 SDAD1P2-201ENST00000441308 2028 ntBASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LOC102724428A0A0B4J2F2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 LINC01355-201ENST00000566551 5444 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 MIR411-201ENST00000362239 96 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 SNORD113-8-201ENST00000363497 74 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 AL079342.1-201ENST00000401460 267 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 LAP3P1-201ENST00000403648 294 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 RNU6-1140P-201ENST00000410517 106 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 PIGFP3-201ENST00000441918 722 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 AL049874.1-201ENST00000489560 388 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 RNU7-175P-201ENST00000515915 61 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 RNA5SP208-201ENST00000516156 78 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 Y_RNA.706-201ENST00000516933 99 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC109479.2-201ENST00000517842 174 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 CASP1P1-201ENST00000526345 212 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 AC087441.2-201ENST00000529141 262 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 HMGB1P14-201ENST00000557424 591 ntBASIC4.76□□□□□ -1.65
LOC102724428A0A0B4J2F2 CYP4A43P-201ENST00000568156 121 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms