Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AL731537.2-201ENST00000561565 951 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 SUB1P4-201ENST00000566062 339 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 MIR4637-201ENST00000582405 84 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AL161798.1-201ENST00000604630 131 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC087045.1-201ENST00000605856 382 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 MIR6134-201ENST00000617606 109 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC084824.4-201ENST00000620106 731 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AL121890.5-201ENST00000620848 304 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AL442644.1-201ENST00000454390 3105 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AL391516.1-201ENST00000554380 2449 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC092125.1-201ENST00000562568 1995 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 SNORD1A-201ENST00000364968 72 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-359P-201ENST00000365466 108 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 DHFRP6-201ENST00000401776 268 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AL139421.1-201ENST00000423010 169 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC092634.2-201ENST00000428146 1010 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC027119.1-201ENST00000440877 241 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 MTND5P8-201ENST00000449817 1083 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1132P-201ENST00000459214 107 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 TMEM251P1-201ENST00000503717 318 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 RNA5SP436-201ENST00000516020 115 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 RN7SKP49-201ENST00000516675 260 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-586P-201ENST00000517265 104 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC011712.1-201ENST00000588959 234 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 NIFKP6-201ENST00000598115 845 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AL022345.1-201ENST00000607292 135 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AC013470.4-201ENST00000619978 986 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 AP003485.1-201ENST00000625093 753 ntBASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV17A0A0B4J275 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNA5SP327-201ENST00000362494 101 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1167P-201ENST00000363227 94 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1066P-201ENST00000363573 105 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-353P-201ENST00000364266 108 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 Y_RNA.234-201ENST00000364409 97 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1078P-201ENST00000364522 103 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 Y_RNA.393-201ENST00000383936 102 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 MTCO2P5-201ENST00000422621 426 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AL590623.1-201ENST00000427864 105 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 OR6C5P-201ENST00000452388 923 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNA5SP404-201ENST00000517118 132 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC022861.1-201ENST00000522981 663 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC002400.1-201ENST00000569310 726 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC098614.4-201ENST00000607601 462 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC009237.15-201ENST00000610252 501 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC008759.3-201ENST00000613300 508 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AL078604.3-201ENST00000615580 211 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 AC253576.2-201ENST00000618815 580 ntBASIC0.68□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-188P-201ENST00000364207 107 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1222P-201ENST00000384615 107 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AL590084.2-201ENST00000401481 382 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 MTND4LP14-201ENST00000429447 288 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AL135790.2-201ENST00000437701 267 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 RNFT1P2-201ENST00000443064 757 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC020550.1-201ENST00000447385 163 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC087477.1-201ENST00000465747 340 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC021382.1-201ENST00000483523 359 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC108078.1-201ENST00000508073 725 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC116655.1-201ENST00000508324 901 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 SNORD116-28-201ENST00000516123 91 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 RNU7-40P-201ENST00000516397 64 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1183P-201ENST00000517054 60 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 CENPUP1-201ENST00000526649 1202 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC136619.2-201ENST00000563361 631 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 CYP4A27P-201ENST00000567218 190 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 RPL30P11-203ENST00000598995 310 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 BBIP1P1-201ENST00000602999 279 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC013244.2-201ENST00000603396 103 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC034229.4-201ENST00000607861 441 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 TUG1_2.1-201ENST00000614234 87 ntBASIC0.67□□□□□ -2.3
TRAV17A0A0B4J275 AC019226.1-201ENST00000625666 515 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms