Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC119751.3-201ENST00000399720 670 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 RPL17P35-201ENST00000432217 549 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 SNRPEP7-201ENST00000438350 220 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AL096829.2-201ENST00000446582 742 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC009474.2-201ENST00000451383 136 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 RN7SKP210-201ENST00000459176 261 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 OR2A41P-201ENST00000473586 105 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 RPL30P7-201ENST00000479312 323 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 HMGN1P13-201ENST00000505795 138 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AP003033.1-201ENST00000527244 415 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 SUB1P4-201ENST00000566062 339 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 MIR4421-201ENST00000578133 69 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 SNORA77B-201ENST00000578179 125 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 MIR3660-201ENST00000584845 100 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC090186.1-201ENST00000605991 572 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC112204.3-201ENST00000623822 332 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AC092656.1-203ENST00000624134 423 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 AP000560.1-201ENST00000624150 1937 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-1284P-201ENST00000363701 100 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-944P-201ENST00000364023 107 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-289P-201ENST00000364093 107 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-843P-201ENST00000384454 104 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-160P-201ENST00000384591 107 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 MIR29B2-201ENST00000385055 81 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 SNORA40C-201ENST00000391285 128 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 CBX3P9-201ENST00000402326 552 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 CST2P1-201ENST00000425770 87 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC004223.1-201ENST00000479840 271 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RPS3AP22-201ENST00000488297 769 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AP006587.4-201ENST00000526053 529 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 RAB11AP2-201ENST00000545905 639 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 BNIP3P30-201ENST00000601184 574 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC012467.1-201ENST00000607740 256 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 MIR8063-201ENST00000621930 81 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 AC130454.1-201ENST00000622948 401 ntBASIC0.89□□□□□ -2.27
TRAV4A0A0B4J268 SNORD33-201ENST00000362761 85 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-1210P-201ENST00000363775 107 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-853P-201ENST00000364306 107 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-487P-201ENST00000365430 104 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-14P-201ENST00000384630 106 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 MIR19A-201ENST00000384878 82 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 MIR764-201ENST00000390811 85 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 UBE2V1P10-201ENST00000414685 269 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RSL24D1P8-201ENST00000434442 492 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 HMGB1P31-201ENST00000437242 427 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 PAXBP1P1-201ENST00000449315 447 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RNY4P37-201ENST00000516225 96 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-64P-201ENST00000517119 105 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 DNAJC19P9-201ENST00000555084 351 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AC136618.2-201ENST00000575091 400 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 AL353997.5-201ENST00000618886 171 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 ICE2P2-201ENST00000483823 2787 ntBASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV4A0A0B4J268 SNORA7.1-201ENST00000363750 139 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 RNA5SP493-201ENST00000364115 91 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 Y_RNA.408-201ENST00000383987 102 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-166P-201ENST00000384371 107 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-817P-201ENST00000391083 104 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC139712.2-201ENST00000424302 339 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 RPS27P16-201ENST00000425758 201 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 RPL30P6-201ENST00000475925 342 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC079140.2-201ENST00000506193 142 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 DEFB130C-202ENST00000530001 230 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC015712.3-201ENST00000559380 164 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AL512347.1-201ENST00000566420 503 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC012414.6-201ENST00000568241 401 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC005786.1-201ENST00000588553 154 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms