Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC024909.2-201ENST00000553035 286 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC073648.5-201ENST00000603502 305 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 U6.42-201ENST00000618440 107 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC011155.2-201ENST00000623202 216 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC092656.1-203ENST00000624134 423 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 SNORA75B-201ENST00000384053 137 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RNU1-52P-201ENST00000384190 164 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 Y_RNA.582-201ENST00000391023 95 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AL365338.1-201ENST00000422282 858 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 CALM2P2-201ENST00000428512 440 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RPS29P6-201ENST00000438196 145 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC092001.1-201ENST00000453012 261 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RNU7-182P-201ENST00000459009 62 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC090525.1-201ENST00000479116 478 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC018437.1-201ENST00000492214 406 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC104806.1-201ENST00000508720 308 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 RANP3-201ENST00000530970 276 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 OR5AL2P-201ENST00000532185 920 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 MIR4769-201ENST00000584126 77 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 AC096772.1-201ENST00000609146 564 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PCDHGA1Q9Y5H4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-371P-201ENST00000364283 108 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 SNORA62.1-201ENST00000364287 154 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNU4-40P-201ENST00000364351 143 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNU4-48P-201ENST00000365559 182 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNA5SP425-201ENST00000410336 112 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNU4-53P-201ENST00000410828 140 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RNA5SP111-201ENST00000411386 101 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL451074.5-201ENST00000415894 435 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RPS3AP44-201ENST00000425466 790 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL121769.1-201ENST00000469473 401 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 RPL36AP48-201ENST00000485521 314 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 ACA59.2-201ENST00000517061 156 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 IGKV3-31-201ENST00000523109 329 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 SUB1P2-201ENST00000556401 297 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AC009063.1-201ENST00000563342 702 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 MIR548AC-201ENST00000585049 88 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL158827.2-201ENST00000602494 330 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL670379.4-201ENST00000605279 254 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL020991.1-201ENST00000612314 373 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 SEPT14P19-203ENST00000633205 211 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 AL691447.3-201ENST00000635020 330 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 U6.114-201ENST00000636407 96 ntBASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA1Q9Y5H4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 MIR412-201ENST00000362142 91 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 SNORD62.1-201ENST00000362541 86 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 MIR518D-201ENST00000385014 87 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 GSTA9P-201ENST00000406231 611 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AL663109.1-201ENST00000411498 844 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 OR6C66P-201ENST00000414917 930 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 RPLP0P7-201ENST00000416050 667 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC009963.1-201ENST00000417265 157 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AL353621.1-201ENST00000418219 243 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms