Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RPS27AP10-201ENST00000496103 208 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AC026801.1-201ENST00000497178 464 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 RNU6-1332P-201ENST00000516666 104 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 CYCSP39-201ENST00000565821 309 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 UBL5P2-201ENST00000583788 219 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 MIR3672-201ENST00000584290 82 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 AC023043.2-201ENST00000589678 1026 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AL133393.1-201ENST00000603277 287 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AC104237.2-201ENST00000612456 443 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 uc_338.15-201ENST00000615470 191 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AL133216.2-202ENST00000634512 349 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKP3Q9Y446 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC138393.1-203ENST00000327086 343 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 RNU6-214P-201ENST00000384130 107 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 Y_RNA.529-201ENST00000384586 119 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 MTND3P23-201ENST00000431980 347 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AL359672.1-201ENST00000442302 409 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 RPS12P18-201ENST00000442381 270 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AMD1P1-201ENST00000457220 922 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC104472.2-201ENST00000469035 601 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 RPS29P20-201ENST00000489592 171 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 MTCO1P29-201ENST00000496868 288 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 SNORA31.1-201ENST00000515993 133 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 SNORA31.5-201ENST00000516190 133 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 RNU6-1088P-201ENST00000516850 104 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 NACAP3-201ENST00000552100 481 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 OR1M4P-201ENST00000589199 287 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.09□□□□□ -1.91
PKP3Q9Y446 AL117336.2-201ENST00000602435 335 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 AL138726.1-201ENST00000614873 333 ntBASIC3.09□□□□□ -1.91
PKP3Q9Y446 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKP3Q9Y446 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
PKP3Q9Y446 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKP3Q9Y446 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKP3Q9Y446 Y_RNA.212-201ENST00000364177 102 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 RNA5SP252-201ENST00000391131 119 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 AL139396.1-201ENST00000421137 167 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC233279.1-201ENST00000455300 423 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 BTF3P15-201ENST00000455606 336 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC146507.2-201ENST00000460608 476 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 Y_RNA.682-201ENST00000516457 100 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 Y_RNA.691-201ENST00000516611 103 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 RNU6-566P-201ENST00000516790 107 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 LINC00933-203ENST00000559812 219 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 RPS3AP23-202ENST00000574601 686 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC138761.3-201ENST00000579993 334 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 YPEL5P2-201ENST00000605553 359 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC087045.1-201ENST00000605856 382 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 ATP5A1P2-202ENST00000616464 443 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC112487.2-201ENST00000637950 304 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC110774.1-201ENST00000623567 2018 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PKP3Q9Y446 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
PKP3Q9Y446 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
PKP3Q9Y446 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PKP3Q9Y446 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PKP3Q9Y446 RNU6-562P-201ENST00000362731 107 ntBASIC3.07□□□□□ -1.92
PKP3Q9Y446 Y_RNA.135-201ENST00000363439 95 ntBASIC3.07□□□□□ -1.92
PKP3Q9Y446 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
PKP3Q9Y446 Z98749.2-208ENST00000381646 500 ntBASIC3.07□□□□□ -1.92
PKP3Q9Y446 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKP3Q9Y446 SNORD67-201ENST00000390833 111 ntBASIC3.07□□□□□ -1.92
PKP3Q9Y446 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms