Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RNA5SP200-201ENST00000516360 103 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 Y_RNA.689-201ENST00000516589 107 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 MTATP6P15-201ENST00000527233 835 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AL022154.1-201ENST00000604698 785 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 BCRP9-201ENST00000605312 388 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC046143.2-201ENST00000609789 160 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC103710.2-201ENST00000609912 942 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AL359547.2-201ENST00000615810 418 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 RNU5E-6P-201ENST00000365574 115 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 SNORD116.1-201ENST00000365628 92 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 MIR221-201ENST00000385135 110 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AL357139.1-201ENST00000407792 426 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 Y_RNA.597-201ENST00000410463 100 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 RNU2-52P-201ENST00000410680 190 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 RPS15AP10-201ENST00000432472 382 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AL831737.1-201ENST00000441288 271 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 NDUFB1P2-201ENST00000449477 176 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AP001025.1-201ENST00000486139 332 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 HMGN1P13-201ENST00000505795 138 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 MTND2P33-201ENST00000506452 1031 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 RNVU1-2-201ENST00000516326 135 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AP001646.1-201ENST00000527936 915 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 EIF4BP1-201ENST00000554881 351 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 MIR3908-201ENST00000579798 126 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AL138889.2-201ENST00000603883 242 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AP000860.1-201ENST00000605250 559 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AP000654.2-201ENST00000605633 586 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AC005014.3-201ENST00000605985 190 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AC135507.2-201ENST00000612443 309 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AC091304.6-201ENST00000619761 202 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 AC106858.1-201ENST00000637497 429 ntBASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CHTOPQ9Y3Y2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 Y_RNA.40-201ENST00000362645 93 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-960P-201ENST00000364056 120 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-1000P-201ENST00000391066 106 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 NDUFB4P4-201ENST00000404822 243 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 MIR1267-201ENST00000408723 78 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 RPL23AP30-201ENST00000432419 501 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 CALM1P1-201ENST00000442082 433 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC112206.4-201ENST00000515142 405 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 SNORA31.17-201ENST00000516953 127 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 TMF1P1-201ENST00000576058 373 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 LARP7P3-201ENST00000579888 337 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC078795.2-201ENST00000602835 1252 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AL355816.2-201ENST00000610049 647 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AL138960.2-201ENST00000625145 535 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 AC245060.5-201ENST00000610778 3293 ntBASIC1.46□□□□□ -2.18
CHTOPQ9Y3Y2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 OR5J1P-201ENST00000313544 939 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-511P-201ENST00000363496 107 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 SNORA80A-201ENST00000363922 136 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 SNORA75B-201ENST00000384053 137 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 RPL32P28-201ENST00000443577 397 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AL360221.1-201ENST00000445989 335 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AL118520.1-201ENST00000450770 291 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AL353752.1-201ENST00000454946 260 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AL160236.1-201ENST00000556317 195 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 ELOCP29-201ENST00000588193 334 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC005786.1-201ENST00000588553 154 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC022022.2-201ENST00000602989 360 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC006338.1-201ENST00000618453 749 ntBASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHTOPQ9Y3Y2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 RNA5SP493-201ENST00000364115 91 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 RPS3AP36-201ENST00000398190 775 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 VN1R51P-201ENST00000411675 945 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC074117.2-201ENST00000417130 397 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms