Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC109445.1-201ENST00000512356 383 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 RNA5SP216-201ENST00000516111 123 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 RNU2-53P-201ENST00000516257 147 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 RN7SKP219-201ENST00000516825 296 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 MTND1P36-201ENST00000522384 936 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 ARL2BPP2-201ENST00000550907 489 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC068620.3-201ENST00000602749 560 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC016925.2-201ENST00000605108 242 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 RMST_6.1-201ENST00000611980 203 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AL121895.2-201ENST00000619558 447 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 AC091965.5-201ENST00000624785 342 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-338P-201ENST00000383888 105 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 SNORD14D-201ENST00000384390 87 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 RNU11-3P-201ENST00000391111 133 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 HMGB1P18-201ENST00000438801 619 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC108059.3-201ENST00000456388 214 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-953P-201ENST00000459154 107 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 SUMO2P5-201ENST00000506790 245 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC009712.1-201ENST00000564938 316 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC010900.2-201ENST00000604508 210 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC093788.1-201ENST00000609356 927 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-1192P-201ENST00000612197 107 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-489P-201ENST00000618289 107 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AL512643.1-201ENST00000635735 524 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 AC092125.1-201ENST00000562568 1995 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 RBBP8P1-201ENST00000449447 1844 ntBASIC1.26□□□□□ -2.21
HDGFL3Q9Y3E1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-413P-201ENST00000384115 107 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-1274P-201ENST00000384557 107 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 MIR597-201ENST00000384968 97 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 SNORA17.3-201ENST00000391159 129 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 RNU2-32P-201ENST00000411193 191 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AP000949.1-201ENST00000438328 629 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC007327.1-201ENST00000447461 264 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC003071.1-201ENST00000451219 789 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 RNA5SP57-201ENST00000459463 123 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 MED28P2-201ENST00000475771 317 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC021146.2-201ENST00000504736 556 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC109927.2-201ENST00000506416 303 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-1315P-201ENST00000517187 99 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AP005597.4-201ENST00000526762 229 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AP003392.2-201ENST00000527269 208 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 uc_338.15-201ENST00000615470 191 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 AC099842.1-201ENST00000619919 596 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 MTND5P42-201ENST00000637720 498 ntBASIC1.25□□□□□ -2.21
HDGFL3Q9Y3E1 ZNF680P1-201ENST00000436625 1469 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 FARSBP1-201ENST00000435808 1778 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-661P-201ENST00000362409 107 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 SNORA4.3-201ENST00000365564 137 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-546P-201ENST00000383991 107 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 Y_RNA.472-201ENST00000384322 102 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-843P-201ENST00000384454 104 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-1257P-201ENST00000384625 110 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AC119751.3-201ENST00000399720 670 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 MIR1305-201ENST00000408300 86 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 SRIP3-201ENST00000413200 219 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 RAC1P6-201ENST00000423911 575 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AC104058.1-201ENST00000448028 297 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms