Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC233981.2-201ENST00000611524 1614 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AC004925.1-201ENST00000624256 2706 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 HAUS6P2-201ENST00000433254 2404 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 MIR448-201ENST00000362131 111 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 Y_RNA.286-201ENST00000364813 102 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNU6-326P-201ENST00000365480 107 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNU6-741P-201ENST00000383889 107 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNY1P5-201ENST00000383890 115 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNA5SP213-201ENST00000391031 106 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AL033519.2-201ENST00000403958 392 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 CYCSP32-201ENST00000440548 321 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 snoU109.2-201ENST00000459316 135 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AC105137.1-201ENST00000484355 562 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 VWA8P1-201ENST00000510889 176 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNA5SP165-201ENST00000517142 115 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AC022559.1-201ENST00000520905 205 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 MIR4782-201ENST00000577987 79 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AL162424.1-201ENST00000602325 221 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RPL23AP88-201ENST00000605759 454 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 SCARNA4-202ENST00000625402 129 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 ZNF826P-207ENST00000622273 1910 ntBASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP4E1Q9UPM8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AL359854.1-201ENST00000614203 1594 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC126755.2-208ENST00000327792 462 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC138969.1-213ENST00000331436 462 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RNU6-335P-201ENST00000364563 113 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RNU6-740P-201ENST00000364734 105 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RNU6-926P-201ENST00000384075 107 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RNU6-968P-201ENST00000384076 107 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 MIR513A2-201ENST00000385249 127 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 SNORA53-201ENST00000391141 249 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 TOMM22P1-201ENST00000418578 312 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC006011.1-201ENST00000442758 349 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC010285.1-201ENST00000470580 392 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 KC877373.1-201ENST00000479066 408 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RPL23AP75-201ENST00000491601 451 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC025554.1-201ENST00000505641 188 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RNU6-1278P-201ENST00000516130 107 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RNA5SP154-201ENST00000516193 111 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 MIR4423-201ENST00000580922 80 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 MZT1P2-201ENST00000604387 248 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC072026.1-201ENST00000605023 201 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 MIR8059-201ENST00000620427 81 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC027309.3-201ENST00000623419 351 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC090740.1-201ENST00000623193 2262 ntBASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
AP4E1Q9UPM8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 RNU6-1020P-201ENST00000363684 107 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 SNORD115-32-201ENST00000364079 82 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 Y_RNA.292-201ENST00000364904 97 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 SNORA37-201ENST00000384504 129 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 RNU1-139P-201ENST00000391307 165 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 RNU2-31P-201ENST00000516954 155 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 AP003730.1-201ENST00000524605 285 ntBASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
AP4E1Q9UPM8 SNORD113-5-201ENST00000607261 78 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms