Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL356274.1-201ENST00000617064 410 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.20-201ENST00000362479 113 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.65-201ENST00000362846 100 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.276-201ENST00000364732 109 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 SNORD50B-201ENST00000364995 70 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 SNORA54-201ENST00000384281 123 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 MIR517A-201ENST00000385001 87 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-174P-201ENST00000410406 106 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-293P-201ENST00000411259 106 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-387P-201ENST00000411331 105 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AL034379.1-201ENST00000423216 253 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC243772.1-201ENST00000451620 410 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC108059.3-201ENST00000456388 214 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 TRBVB-201ENST00000477100 408 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 HMGN1P28-201ENST00000521340 364 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AL161423.1-201ENST00000613700 262 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC058791.1-201ENST00000608412 3198 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 ZNF33CP-201ENST00000432492 2030 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 PABPC1P7-201ENST00000413177 1513 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.19-201ENST00000362462 99 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNA5SP258-201ENST00000362750 119 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-984P-201ENST00000363236 109 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-179P-201ENST00000363350 107 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.291-201ENST00000364886 113 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.352-201ENST00000365439 102 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-378P-201ENST00000384324 107 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 MIR625-201ENST00000385047 85 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU6-121P-201ENST00000410525 99 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RPL7P46-201ENST00000425129 740 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 USMG5P1-201ENST00000425964 177 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AL353597.2-202ENST00000434901 373 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 ANP32BP2-201ENST00000454525 545 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU7-187P-201ENST00000458985 68 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RN7SL594P-201ENST00000470590 287 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 SNORA31.6-201ENST00000516241 130 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU1-143P-201ENST00000516296 146 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 SNORA40.15-201ENST00000516884 107 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 CYCSP27-201ENST00000527643 293 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RPL23AP92-201ENST00000603609 255 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC004832.4-201ENST00000608952 331 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 U1.23-201ENST00000610293 146 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 RNU1-68P-201ENST00000615382 146 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 MIR376A1-201ENST00000616574 68 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 U1.39-201ENST00000621562 146 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 NCAPGP1-201ENST00000505112 1814 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 AC011460.1-201ENST00000636268 1834 ntBASIC2.51□□□□□ -2.01
NOTCH3Q9UM47 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.106-201ENST00000363189 100 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RNU4-42P-201ENST00000364738 142 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.478-201ENST00000384358 107 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RPL21P24-201ENST00000413752 448 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AL590632.1-201ENST00000424289 371 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AL353997.1-201ENST00000432936 108 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC010095.1-201ENST00000443543 144 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC016696.1-201ENST00000446949 318 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 SNORD121B-201ENST00000458838 81 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.644-201ENST00000459006 113 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 SNORD97-201ENST00000459187 142 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC021382.1-201ENST00000483523 359 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RNU6-202P-201ENST00000515998 96 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.674-201ENST00000516362 113 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 SNORA81.3-201ENST00000517283 198 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC090517.1-201ENST00000569307 266 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AL451142.2-201ENST00000429076 2090 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms