Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 TRAV37-201ENST00000553906 342 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AC025627.2-201ENST00000576220 160 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 MIR4643-201ENST00000577473 78 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AP000787.2-201ENST00000604432 568 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AC009318.2-201ENST00000610917 651 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AC004852.3-201ENST00000614131 326 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AC006065.5-201ENST00000623427 349 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 AL034408.1-202ENST00000636088 415 ntBASIC4.02□□□□□ -1.77
MBD1Q9UIS9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD1Q9UIS9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 UBE2L2-201ENST00000254302 429 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-37P-201ENST00000362692 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 SNORD50.1-201ENST00000362987 71 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-11P-201ENST00000364234 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-7-201ENST00000364784 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-8-201ENST00000365467 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-25P-201ENST00000383873 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-1-201ENST00000383898 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-36P-201ENST00000384172 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-4P-201ENST00000384205 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-5P-201ENST00000384238 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-3P-201ENST00000384314 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-16P-201ENST00000384385 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-15P-201ENST00000384534 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-2-201ENST00000384627 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-29P-201ENST00000384637 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-9-201ENST00000384776 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 Y_RNA.581-201ENST00000391017 97 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-882P-201ENST00000391025 103 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 MTCYBP2-201ENST00000407745 171 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 BX679664.1-201ENST00000434429 253 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RPL23AP22-201ENST00000437556 453 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RN7SL585P-201ENST00000470538 280 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-927P-201ENST00000516199 100 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU1-95P-201ENST00000516357 160 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 SNORA74D-201ENST00000516404 141 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU1-128P-201ENST00000516704 160 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 SCARNA24.2-201ENST00000516968 130 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AC087441.2-201ENST00000529141 262 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AP002770.2-201ENST00000543613 532 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 CYCSP30-201ENST00000546447 172 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AL157871.3-201ENST00000557231 293 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 MIR1273C-201ENST00000578669 77 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 MIR548AI-201ENST00000579940 88 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RNU6-6P-201ENST00000606623 107 ntBASIC4.01□□□□□ -1.77
MBD1Q9UIS9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD1Q9UIS9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
MBD1Q9UIS9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MBD1Q9UIS9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
MBD1Q9UIS9 Y_RNA.143-201ENST00000363520 106 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4□□□□□ -1.77
MBD1Q9UIS9 SNORA5A-201ENST00000384111 134 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 MIR513A2-201ENST00000385249 127 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 RPL21P75-201ENST00000396599 483 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 MIR190B-201ENST00000401119 79 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 RPL21P28-201ENST00000401418 483 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 AL590556.1-201ENST00000423231 483 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4□□□□□ -1.77
MBD1Q9UIS9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4□□□□□ -1.77
MBD1Q9UIS9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
MBD1Q9UIS9 AC013470.1-201ENST00000453438 462 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 snoU13.3-201ENST00000459441 104 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 RPL21P11-201ENST00000461458 483 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 RPL21P39-201ENST00000463605 483 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 AC132942.1-201ENST00000486753 483 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 AC093591.1-201ENST00000491435 481 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 AC078817.1-201ENST00000492623 435 ntBASIC4□□□□□ -1.77
MBD1Q9UIS9 RPL21P16-201ENST00000495531 483 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms