Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC144521.1-201ENST00000607148 956 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC091965.4-201ENST00000607691 587 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC092953.2-201ENST00000608000 699 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC138627.2-201ENST00000624202 601 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AL136313.1-201ENST00000624804 202 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 TEX21P-201ENST00000447107 1476 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 RNA5SP190-201ENST00000365222 118 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL133475.1-201ENST00000404414 305 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 RNU2-62P-201ENST00000410868 191 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 RPL23AP39-201ENST00000415533 405 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL158823.1-201ENST00000418441 478 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 MTND4P25-201ENST00000441039 533 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL606662.1-201ENST00000445763 553 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 SNORD97-201ENST00000459187 142 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 RPL39P36-201ENST00000490784 156 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC108078.2-201ENST00000510750 236 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC117532.1-201ENST00000514638 323 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 MTATP6P15-201ENST00000527233 835 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC090888.2-201ENST00000559765 1144 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 LINC00933-203ENST00000559812 219 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 VN1R80P-201ENST00000597126 338 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.6-201ENST00000603753 252 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.11-201ENST00000604059 253 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL358072.1-201ENST00000604156 575 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AC008162.1-201ENST00000604718 254 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.1-201ENST00000604752 252 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.5-201ENST00000605253 252 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.12-201ENST00000605291 253 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.8-201ENST00000605353 252 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL670379.7-201ENST00000605823 252 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 AL773524.1-201ENST00000614065 229 ntBASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CTNNA3Q9UI47 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 RNU4-28P-201ENST00000364739 141 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 Y_RNA.302-201ENST00000364997 102 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 MIR95-201ENST00000385072 81 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 MIR513B-201ENST00000385136 84 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 SSR1P2-201ENST00000415208 787 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 VPS26BP1-201ENST00000417155 755 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 BTF3P4-201ENST00000418852 495 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AL645568.3-201ENST00000433683 316 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 BTF3P15-201ENST00000455606 336 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 snoU109.1-201ENST00000459339 135 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 MTND2P32-201ENST00000521584 1038 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC013828.2-201ENST00000532487 235 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC090897.2-201ENST00000581715 130 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 BNIP3P9-201ENST00000603714 553 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC013244.3-201ENST00000605614 388 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC016597.2-201ENST00000613256 341 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AL139418.1-201ENST00000613613 177 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 uc_338.12-201ENST00000616344 181 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC084768.2-201ENST00000622736 221 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 AC103706.2-201ENST00000638080 240 ntBASIC2.09□□□□□ -2.07
CTNNA3Q9UI47 RNU5E-1-201ENST00000362477 120 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 Y_RNA.118-201ENST00000363300 101 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 RNU6-898P-201ENST00000365627 104 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 SNORA67.5-201ENST00000391036 107 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC127391.1-201ENST00000411737 98 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AL022400.1-201ENST00000423946 935 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AL353777.1-201ENST00000425552 326 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 Z73417.1-201ENST00000447373 778 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 TRMT112P2-201ENST00000512910 132 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC034114.1-201ENST00000520293 285 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 SUB1P3-201ENST00000564581 315 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AL356432.3-201ENST00000568952 465 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 MIR3146-201ENST00000580367 79 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC010928.2-201ENST00000588017 287 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AL713866.2-201ENST00000603579 219 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms