Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC022893.3-201ENST00000607665 437 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 Z99571.1-201ENST00000636677 394 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 U6.99-201ENST00000637524 83 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 Z82209.1-201ENST00000422141 2135 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 RNU4-91P-201ENST00000364778 135 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-443P-201ENST00000384780 107 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 SUMO2P12-201ENST00000405924 140 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AL136380.1-201ENST00000447970 162 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC011753.1-201ENST00000451001 220 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AL441985.1-201ENST00000457727 251 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC098591.2-201ENST00000510152 315 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC084851.1-201ENST00000529105 249 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 MIR4781-201ENST00000585250 76 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 HMGN1P30-201ENST00000589286 268 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AL359547.2-201ENST00000615810 418 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC099654.13-201ENST00000639774 207 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 RNU4-1-201ENST00000363925 141 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 RNU4-52P-201ENST00000384209 138 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 MT-TH-201ENST00000387441 69 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 SNORA40.18-201ENST00000391200 128 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 RNU2-20P-201ENST00000410425 191 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AL109913.1-201ENST00000421173 514 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AL445567.1-201ENST00000439121 144 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-1315P-201ENST00000517187 99 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AP003122.4-201ENST00000530980 758 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AL391813.1-201ENST00000603098 260 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AC068276.1-201ENST00000605793 379 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 AC120349.3-201ENST00000624377 529 ntBASIC2.48□□□□□ -2.01
NPC1L1Q9UHC9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AC004520.1-201ENST00000608362 1413 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 MTND4P27-201ENST00000450813 1354 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 RNU5E-1-201ENST00000362477 120 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 RPS3AP36-201ENST00000398190 775 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 CYCSP46-201ENST00000423569 204 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 MED13P1-201ENST00000428342 171 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 RPL23AP30-201ENST00000432419 501 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AL033528.1-201ENST00000453780 140 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-914P-201ENST00000516749 109 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AC023824.2-201ENST00000566185 400 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 MIR1273C-201ENST00000578669 77 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 AL451064.1-201ENST00000607718 471 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 MIR203B-201ENST00000636080 86 ntBASIC2.47□□□□□ -2.01
NPC1L1Q9UHC9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 MTND5P30-201ENST00000452896 1731 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 RNU6-395P-201ENST00000365662 106 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 MIR1287-201ENST00000408492 90 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 RNU2-39P-201ENST00000410604 198 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 RPS3AP3-201ENST00000411933 242 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 CETN4P-201ENST00000432407 469 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 PGBD4P3-201ENST00000440731 581 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 AL161651.1-201ENST00000440882 223 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 MTND6P13-201ENST00000443510 523 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 RNA5SP269-201ENST00000459032 137 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 AC139453.3-201ENST00000493276 369 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 AC109927.2-201ENST00000506416 303 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 AC117522.1-201ENST00000509821 380 ntBASIC2.46□□□□□ -2.02
NPC1L1Q9UHC9 Y_RNA.689-201ENST00000516589 107 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms