Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXC10Q9NYD6 TEX21P-201ENST00000447107 1476 ntBASIC2.15□□□□□ -2.06
HOXC10Q9NYD6 AL445523.1-201ENST00000451184 1362 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 HSPE1P11-201ENST00000339579 310 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 RNU4-1-201ENST00000363925 141 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 SMIM11P1-201ENST00000369586 178 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 RNU2-36P-201ENST00000410361 191 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 RNU2-20P-201ENST00000410425 191 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AC005178.1-201ENST00000508392 440 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 SNORA25.15-201ENST00000516487 89 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AC243960.4-201ENST00000600532 288 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 BNIP3P9-201ENST00000603714 553 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AP000860.1-201ENST00000605250 559 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AC091834.1-201ENST00000614543 472 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 MIR6134-201ENST00000617606 109 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 AC092192.1-201ENST00000633154 1018 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 CDC27P3-201ENST00000635418 1910 ntBASIC2.15□□□□□ -2.07
HOXC10Q9NYD6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 RNU5F-6P-201ENST00000362979 116 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 RNU6-533P-201ENST00000384144 107 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 RNU6-809P-201ENST00000384461 107 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 RPL22P17-201ENST00000438729 315 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC003989.2-201ENST00000440224 169 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC009238.1-201ENST00000442165 424 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC009237.6-201ENST00000446969 424 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC003071.1-201ENST00000451219 789 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC139453.3-201ENST00000493276 369 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC009902.1-201ENST00000519351 183 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 MTND4LP18-201ENST00000526864 291 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 FAM92A1P1-201ENST00000528023 890 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 OR5AL2P-201ENST00000532185 920 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 MIR5697-201ENST00000578045 78 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC090616.2-202ENST00000584248 222 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC016727.1-205ENST00000605437 569 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC018638.7-201ENST00000605836 1114 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AL031775.1-201ENST00000607014 887 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 RNU6-87P-201ENST00000607561 108 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC017037.3-201ENST00000625016 472 ntBASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXC10Q9NYD6 Z98749.2-208ENST00000381646 500 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 MIR301A-201ENST00000385261 86 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 SNORA40.19-201ENST00000390846 128 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 MTND4P20-201ENST00000424125 869 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AL161651.1-201ENST00000440882 223 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AL441985.1-201ENST00000457727 251 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 CYP2C59P-201ENST00000457790 269 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 MTND1P3-201ENST00000484956 952 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 RNA5SP137-201ENST00000516833 135 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 CBX3P7-201ENST00000532876 502 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC005261.5-201ENST00000596280 355 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AL138963.2-201ENST00000605137 226 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC009878.1-201ENST00000621819 340 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC084768.2-201ENST00000622736 221 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 AC079248.2-201ENST00000623779 326 ntBASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HOXC10Q9NYD6 ADAM3A-203ENST00000461344 2157 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 RNY4P16-201ENST00000364768 94 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 MIR1294-201ENST00000408503 142 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 AC108667.1-201ENST00000428618 249 ntBASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC10Q9NYD6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms