Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC007792.1-201ENST00000623023 402 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX56Q9NY93 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX56Q9NY93 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX56Q9NY93 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX56Q9NY93 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX56Q9NY93 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 SNORD73A-201ENST00000386062 65 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX56Q9NY93 RPS29P13-201ENST00000402041 169 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 RN7SKP111-201ENST00000410349 271 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX56Q9NY93 MICF-203ENST00000432679 129 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 Z96811.1-201ENST00000445880 108 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC006445.1-201ENST00000491925 405 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC097462.2-201ENST00000504623 481 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC110768.1-201ENST00000509222 400 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 Y_RNA.702-201ENST00000516843 96 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 MIR2276-201ENST00000516886 89 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC109329.1-201ENST00000518744 317 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX56Q9NY93 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX56Q9NY93 MIR3616-201ENST00000584070 92 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC006130.2-201ENST00000586202 326 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC006557.5-201ENST00000603126 811 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AL137843.1-201ENST00000605078 385 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX56Q9NY93 AC090617.7-201ENST00000623952 126 ntBASIC3.59□□□□□ -1.83
DDX56Q9NY93 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.59□□□□□ -1.84
DDX56Q9NY93 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
DDX56Q9NY93 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
DDX56Q9NY93 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.59□□□□□ -1.84
DDX56Q9NY93 RNU6-336P-201ENST00000364891 107 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 RNU5E-4P-201ENST00000364931 120 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 SNORA57.1-201ENST00000391227 145 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC097463.2-201ENST00000421074 142 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 MTCO3P46-201ENST00000425787 232 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 SNAP23P1-201ENST00000433229 246 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 BX679664.1-201ENST00000434429 253 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 U8.21-201ENST00000459536 136 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC018437.1-201ENST00000492214 406 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC096745.1-201ENST00000509945 370 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 RNU4-49P-201ENST00000516080 140 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 RN7SKP282-201ENST00000516824 299 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC079598.5-201ENST00000547460 117 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC103996.1-201ENST00000555468 102 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC103810.1-201ENST00000579873 453 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC090897.2-201ENST00000581715 130 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC004832.5-201ENST00000608677 401 ntBASIC3.58□□□□□ -1.84
DDX56Q9NY93 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX56Q9NY93 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX56Q9NY93 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX56Q9NY93 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX56Q9NY93 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX56Q9NY93 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC002543.1-201ENST00000299783 1954 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 RNU6-562P-201ENST00000362731 107 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 RNU6-1010P-201ENST00000362757 107 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 Y_RNA.70-201ENST00000362886 110 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 RNU6-428P-201ENST00000362942 107 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX56Q9NY93 RNU6-622P-201ENST00000384272 103 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 RNU6-831P-201ENST00000384548 107 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AL133475.1-201ENST00000404414 305 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AL513475.1-201ENST00000406602 315 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 RNU6-293P-201ENST00000411259 106 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC093578.1-201ENST00000415219 368 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AL356968.1-201ENST00000416622 474 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AL645568.3-201ENST00000433683 316 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 USP9YP8-201ENST00000441913 500 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 CYCSP35-201ENST00000451978 304 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 RPL7P43-201ENST00000478876 753 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC091951.2-201ENST00000500762 203 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC114801.2-201ENST00000503825 781 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC104576.1-201ENST00000524225 88 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC243972.3-201ENST00000539655 198 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC023043.2-201ENST00000589678 1026 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AL138726.1-201ENST00000614873 333 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC104260.1-201ENST00000616660 539 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 AC022306.2-201ENST00000617563 647 ntBASIC3.57□□□□□ -1.84
DDX56Q9NY93 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX56Q9NY93 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms