Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 RNA5SP143-201ENST00000516936 115 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 RN7SKP40-201ENST00000517211 242 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 RNA5SP179-201ENST00000517284 121 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC084851.1-201ENST00000529105 249 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC120057.2-201ENST00000571520 271 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC098479.1-201ENST00000609225 154 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC068724.3-201ENST00000625906 87 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 MTND5P9-201ENST00000503854 1755 ntBASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PARPBPQ9NWS1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 snoU2_19.2-201ENST00000363024 80 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 Y_RNA.183-201ENST00000363882 113 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 Y_RNA.237-201ENST00000364439 102 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MIR514A1-201ENST00000385133 98 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MIR628-201ENST00000385229 95 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 RNU6-1203P-201ENST00000410703 110 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC007098.1-201ENST00000420122 367 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 PIGPP3-201ENST00000425307 415 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MTND3P9-201ENST00000429526 346 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AL136097.1-201ENST00000456945 913 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 RPL23AP45-201ENST00000476406 468 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AL049830.2-201ENST00000480072 201 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC005921.1-201ENST00000510589 286 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 RN7SKP21-201ENST00000516503 220 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 RNU4-60P-201ENST00000517239 135 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 RRN3P3-201ENST00000549207 578 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MIR3160-1-201ENST00000577972 85 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC053481.4-201ENST00000583164 216 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC002545.1-201ENST00000592511 181 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC091167.4-201ENST00000605079 184 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 MIR6500-201ENST00000622700 86 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC090617.7-201ENST00000623952 126 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 U6.104-201ENST00000637979 90 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.51□□□□□ -1.85
PARPBPQ9NWS1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 Y_RNA.20-201ENST00000362479 113 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 Y_RNA.150-201ENST00000363562 102 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 RNA5SP399-201ENST00000364003 117 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 SNORD14B-201ENST00000364533 90 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 RNA5SP189-201ENST00000364920 115 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 RNA5SP283-201ENST00000365604 119 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 RNU6-395P-201ENST00000365662 106 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 Y_RNA.416-201ENST00000384014 113 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 MTCO3P19-201ENST00000415864 321 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC079354.2-201ENST00000453523 154 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC078918.1-201ENST00000498515 228 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC074250.1-201ENST00000511117 192 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 RNU6-143P-201ENST00000516942 93 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC130289.1-201ENST00000577321 73 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 FAM60BP-201ENST00000578364 658 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 AC048347.1-201ENST00000624621 427 ntBASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.5□□□□□ -1.85
PARPBPQ9NWS1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms