Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 MIR450B-201ENST00000401182 78 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AL356057.2-201ENST00000403318 432 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 SNORA11.1-201ENST00000408133 129 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 NCOR1P3-201ENST00000420479 303 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 snoU13.28-201ENST00000459235 104 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC117503.1-201ENST00000472241 394 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC026801.1-201ENST00000497178 464 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC087854.1-201ENST00000519706 414 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 RNU6-323P-201ENST00000521915 107 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AP000867.2-201ENST00000532468 320 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AP000889.2-201ENST00000532684 490 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 SCOCP1-201ENST00000554676 349 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AC005858.4-201ENST00000623191 700 ntBASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMEM248Q9NWD8 Y_RNA.263-201ENST00000364659 114 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 RNU6-384P-201ENST00000364900 104 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 MIR10A-201ENST00000385043 110 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 HMGB1P9-201ENST00000429856 646 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AC117440.1-201ENST00000474107 571 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 RNU6-256P-201ENST00000516747 97 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AL133393.1-201ENST00000603277 287 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 AL359697.1-201ENST00000624879 587 ntBASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM248Q9NWD8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 Y_RNA.11-201ENST00000362375 109 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 MT-TD-201ENST00000387419 68 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AL356432.1-201ENST00000405809 419 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AL138885.1-201ENST00000405921 675 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 VN1R36P-201ENST00000414936 291 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 MRPL50P4-201ENST00000446432 475 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 RNU7-138P-201ENST00000459479 64 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC103851.1-201ENST00000506833 274 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 SNORA31.1-201ENST00000515993 133 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 SNORA31.5-201ENST00000516190 133 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 RNU6-1183P-201ENST00000517054 60 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 GLYCAM1-201ENST00000546596 285 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AL391261.3-201ENST00000557194 520 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 MIR3942-201ENST00000585264 109 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 NUTF2P8-201ENST00000604593 363 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
TMEM248Q9NWD8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
TMEM248Q9NWD8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.09□□□□□ -1.92
TMEM248Q9NWD8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.92
TMEM248Q9NWD8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 AL353743.1-202ENST00000431724 1695 ntBASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 MTND5P27-201ENST00000428871 1720 ntBASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TMEM248Q9NWD8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms