Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC009487.2-201ENST00000420969 6821 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-715P-201ENST00000365204 103 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 Y_RNA.359-201ENST00000365498 102 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-434P-201ENST00000384376 107 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 MIR592-201ENST00000384959 97 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 OR9R1P-201ENST00000412200 877 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC138623.1-201ENST00000418060 216 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC000111.3-201ENST00000433478 193 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC002486.1-201ENST00000435098 391 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 CALM1P1-201ENST00000442082 433 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 MTCO2P18-201ENST00000457151 658 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC112771.1-201ENST00000463581 102 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 RPL7P43-201ENST00000478876 753 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 RNU1-86P-201ENST00000516108 154 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 RNU1-107P-201ENST00000516617 154 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AGGF1P4-201ENST00000568249 801 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC021646.1-201ENST00000605469 484 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 AC073534.2-201ENST00000620377 381 ntBASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 RNA5SP240-201ENST00000365355 128 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-517P-201ENST00000384362 110 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 DEFB108C-201ENST00000400154 252 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AL663109.1-201ENST00000411498 844 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 PGBD4P6-201ENST00000421501 610 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 MTND1P29-201ENST00000448112 647 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 CYP2C59P-201ENST00000457790 269 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 RNU7-63P-201ENST00000459054 62 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC090096.1-201ENST00000489168 390 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 MTND3P25-201ENST00000509243 135 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 PSMA3P-201ENST00000555485 635 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC136619.2-201ENST00000563361 631 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC105137.2-201ENST00000569073 466 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 AC073539.2-201ENST00000597113 165 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 MIR5739-201ENST00000619803 80 ntBASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BLOC1S4Q9NUP1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL139276.1-201ENST00000311910 1001 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 Y_RNA.51-201ENST00000362725 102 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-393P-201ENST00000384475 107 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 SNORD116-20-201ENST00000384529 92 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-443P-201ENST00000384780 107 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 NUP35P1-201ENST00000422734 947 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC003685.2-201ENST00000422795 395 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC063976.3-201ENST00000426849 329 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 ARL5AP4-201ENST00000430731 512 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC236972.1-201ENST00000433225 199 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL109933.2-201ENST00000452651 260 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 SNRPFP3-201ENST00000457792 225 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AP001486.1-201ENST00000463339 476 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC108078.1-201ENST00000508073 725 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC091133.4-201ENST00000511142 308 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC096725.1-201ENST00000514266 313 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 SMURF2P1-201ENST00000514992 481 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 SNORA43.2-201ENST00000516652 128 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 CKS1BP7-201ENST00000522230 235 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL133241.1-201ENST00000556832 487 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL627309.6-201ENST00000606857 840 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC007684.1-201ENST00000609671 477 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 HMGB1P24-202ENST00000615653 685 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AL031601.2-202ENST00000622650 282 ntBASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms