Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RN7SL429P-201ENST00000479090 223 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RN7SL489P-201ENST00000486185 223 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RN7SL327P-201ENST00000488659 223 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AC108078.1-201ENST00000508073 725 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 SNORA31.6-201ENST00000516241 130 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 SNORA31.18-201ENST00000517043 134 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RPL7P20-201ENST00000520308 745 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 OR5AL2P-201ENST00000532185 920 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 MIR4775-201ENST00000581168 75 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AC004223.2-201ENST00000590309 544 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AL356575.1-201ENST00000603008 283 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RN7SL853P-201ENST00000617250 223 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 U6.42-201ENST00000618440 107 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AC011155.2-201ENST00000623202 216 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 U6.114-201ENST00000636407 96 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AC093536.2-201ENST00000565257 1406 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 SNORA62.1-201ENST00000364287 154 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 RNU6-606P-201ENST00000384721 111 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 RNA5SP111-201ENST00000411386 101 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 OR6C66P-201ENST00000414917 930 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC009963.1-201ENST00000417265 157 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 MTCO2P19-201ENST00000427513 598 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 DNAJC19P4-201ENST00000440115 345 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AL583843.1-201ENST00000456070 346 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC116655.1-201ENST00000508324 901 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC104806.1-201ENST00000508720 308 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 OR4R1P-201ENST00000529879 463 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC090616.3-201ENST00000582184 217 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AC060766.3-201ENST00000591442 263 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 HULC.1-201ENST00000612720 240 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 AL359740.1-201ENST00000624340 592 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 MIR7157-201ENST00000635801 60 ntBASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SMC4Q9NTJ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 RNA5SP393-201ENST00000363423 117 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 RNU6-371P-201ENST00000364283 108 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 SNORD14B-201ENST00000364533 90 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 Y_RNA.409-201ENST00000383990 98 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 RNU5A-6P-201ENST00000384136 116 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 RNU6-301P-201ENST00000384277 107 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 SNORA41-201ENST00000384675 132 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 FTH1P25-201ENST00000447665 469 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 AL441985.1-201ENST00000457727 251 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 GMFBP1-201ENST00000467831 427 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 AC114781.4-201ENST00000513707 639 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 RNU6-581P-201ENST00000516214 105 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 MIR5692A1-201ENST00000580523 69 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 AL670379.4-201ENST00000605279 254 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 AC007684.1-201ENST00000609671 477 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.1□□□□□ -1.91
SMC4Q9NTJ3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 U8.8-201ENST00000365399 135 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 MIR578-201ENST00000384828 96 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 MIR147B-201ENST00000390185 80 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 SUMO1P4-201ENST00000429430 302 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AL360271.2-201ENST00000447710 161 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 HMGB1P30-201ENST00000492455 606 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC010486.1-201ENST00000511793 424 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 ACA59.2-201ENST00000517061 156 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC245505.1-201ENST00000556398 224 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 DEFB131E-202ENST00000602581 683 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms