Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC010900.2-201ENST00000604508 210 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC016727.1-205ENST00000605437 569 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
CISHQ9NSE2 AL133445.2-201ENST00000611191 527 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AL589994.2-201ENST00000621124 579 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC091948.2-201ENST00000636510 279 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CISHQ9NSE2 RNU6-1284P-201ENST00000363701 100 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 MIR518D-201ENST00000385014 87 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 RNU2-48P-201ENST00000410694 191 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 AL022400.1-201ENST00000423946 935 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 MTCO2P25-201ENST00000447065 681 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 BTF3P15-201ENST00000455606 336 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC112492.4-201ENST00000456549 352 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC098862.1-201ENST00000504991 413 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 AP000763.2-201ENST00000540641 163 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC135279.1-201ENST00000543493 504 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC008269.2-201ENST00000561915 1105 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC005776.1-201ENST00000603164 290 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC080078.3-201ENST00000605407 463 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC098614.4-201ENST00000607601 462 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC090970.3-201ENST00000612566 866 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 AC099654.9-201ENST00000637055 678 ntBASIC1.16□□□□□ -2.22
CISHQ9NSE2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
CISHQ9NSE2 SNORD114-19-201ENST00000363072 75 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AL133475.1-201ENST00000404414 305 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 RNA5SP501-201ENST00000410990 112 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 RNU2-41P-201ENST00000410991 178 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 MTCO2P20-201ENST00000437339 673 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 PTENP1-201ENST00000447117 1215 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 PAXBP1P1-201ENST00000449315 447 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 AC109927.2-201ENST00000506416 303 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AC108078.2-201ENST00000510750 236 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AC109329.1-201ENST00000518744 317 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AP003355.1-201ENST00000518956 587 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 AC087894.1-201ENST00000538359 518 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AC098848.2-201ENST00000588023 330 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.15□□□□□ -2.23
CISHQ9NSE2 AC092140.2-201ENST00000618027 521 ntBASIC1.15□□□□□ -2.23
CISHQ9NSE2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CISHQ9NSE2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CISHQ9NSE2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CISHQ9NSE2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU6-1010P-201ENST00000362757 107 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU6-288P-201ENST00000363690 104 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU6-853P-201ENST00000364306 107 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU6-1032P-201ENST00000384100 107 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 SNORD14D-201ENST00000384390 87 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 MIR19A-201ENST00000384878 82 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 MIR597-201ENST00000384968 97 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 Y_RNA.578-201ENST00000390903 88 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU6-817P-201ENST00000391083 104 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU11-3P-201ENST00000391111 133 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 MTND4P3-201ENST00000417829 541 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 SNRPEP10-201ENST00000420249 274 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AL365400.1-201ENST00000431854 640 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 BTBD7P2-201ENST00000441962 620 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 Z73417.1-201ENST00000447373 778 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 MEMO1P3-201ENST00000459811 302 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC104629.1-201ENST00000494226 508 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 RNU6-143P-201ENST00000516942 93 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC009902.1-201ENST00000519351 183 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AP003049.1-201ENST00000529418 457 ntBASIC1.14□□□□□ -2.23
CISHQ9NSE2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.14□□□□□ -2.23
CISHQ9NSE2 AC073410.2-201ENST00000603240 332 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms