Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL589880.1-201ENST00000448271 287 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 RPL31P53-201ENST00000457065 348 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 RPL22P13-201ENST00000493291 347 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 RNU6-1095P-201ENST00000516148 108 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 FAM60CP-201ENST00000591086 664 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC008121.1-201ENST00000603244 268 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC008945.2-201ENST00000606056 604 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC022202.1-201ENST00000613515 211 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 Y_RNA.67-201ENST00000362870 100 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 MIR1285-2-201ENST00000408311 88 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC023141.4-201ENST00000412031 328 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC009310.1-201ENST00000414414 451 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 EIF1P1-201ENST00000421436 341 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC013410.2-201ENST00000422627 201 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 UBE2V2P3-201ENST00000433562 437 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AL133373.1-201ENST00000497098 94 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC104057.1-201ENST00000515547 497 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 RNA5SP112-201ENST00000515937 99 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC068276.1-201ENST00000605793 379 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC008759.3-201ENST00000613300 508 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 uc_338.17-201ENST00000619633 179 ntBASIC0.3□□□□□ -2.36
CHD8Q9HCK8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
CHD8Q9HCK8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 RNU6-270P-201ENST00000364131 105 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 RNU6-730P-201ENST00000383954 104 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 Y_RNA.428-201ENST00000384078 102 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 SNORA40.19-201ENST00000390846 128 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC023512.1-201ENST00000444513 499 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 PAXBP1P1-201ENST00000449315 447 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 PNPLA4P1-201ENST00000458328 305 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC104164.3-201ENST00000467363 1258 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC010615.3-201ENST00000597319 394 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AL355472.4-201ENST00000610233 626 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC084824.5-201ENST00000612009 413 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC008498.1-201ENST00000613012 531 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 RNA5SP361-201ENST00000362686 118 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 SNORD82-201ENST00000365530 70 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 BEND7P1-201ENST00000422058 457 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AL049714.1-201ENST00000466686 347 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC007151.1-201ENST00000572774 483 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC025449.1-201ENST00000603896 529 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AC004492.1-201ENST00000607036 742 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AP002826.1-201ENST00000608835 315 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 AL590410.1-201ENST00000617925 333 ntBASIC0.29□□□□□ -2.36
CHD8Q9HCK8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CHD8Q9HCK8 RNU6-1249P-201ENST00000363237 111 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 RNU6-26P-201ENST00000383985 107 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 MIR608-201ENST00000384820 100 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AL356131.1-201ENST00000405826 414 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC097463.2-201ENST00000421074 142 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AL035410.1-201ENST00000427409 427 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 GTF2IP13-201ENST00000438487 386 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC092393.1-201ENST00000439625 742 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 RNU6-1037P-201ENST00000459571 107 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC006518.2-201ENST00000542513 940 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 CR383656.7-201ENST00000548164 174 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC022254.1-201ENST00000567857 235 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC073544.2-201ENST00000601155 540 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC007490.1-201ENST00000624321 703 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 AC005832.2-201ENST00000538921 1430 ntBASIC0.28□□□□□ -2.36
CHD8Q9HCK8 SNORD115-3-201ENST00000363100 82 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 RNU6-374P-201ENST00000364146 108 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
CHD8Q9HCK8 Y_RNA.475-201ENST00000384345 101 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 RNU6-31P-201ENST00000384388 108 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 RNU6-939P-201ENST00000384634 107 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 MIR325-201ENST00000385260 98 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 RNA5SP56-201ENST00000410277 118 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 RPS15AP38-201ENST00000413110 372 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 MTND4LP11-201ENST00000422184 280 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AC104689.1-201ENST00000473356 768 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 HMGB1P35-201ENST00000503360 598 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AC093677.1-201ENST00000514414 678 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AC008494.2-201ENST00000514544 370 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 SCARNA16.2-201ENST00000516520 172 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms