Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 MIR5690-201ENST00000583739 73 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 NUTF2P8-201ENST00000604593 363 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AC011373.1-201ENST00000607270 237 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AL442067.1-201ENST00000613261 223 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AL138726.1-201ENST00000614873 333 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 U6.114-201ENST00000636407 96 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 AL669831.3-213ENST00000636676 183 ntBASIC3.29□□□□□ -1.88
EBF3Q9H4W6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
EBF3Q9H4W6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RNU6-1040P-201ENST00000383974 107 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RNU6-601P-201ENST00000384540 107 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RNU6-1127P-201ENST00000384580 107 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 MIR607-201ENST00000385241 96 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 EIF4E2P1-201ENST00000393781 255 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC110754.1-201ENST00000399740 601 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RNU6-387P-201ENST00000411331 105 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 CBX3P6-201ENST00000430257 527 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC236972.1-201ENST00000433225 199 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RPL21P112-201ENST00000434403 463 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 RPL12P25-201ENST00000455592 494 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC083806.3-201ENST00000614016 455 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC103705.1-201ENST00000619013 241 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 KPNA2P1-201ENST00000458289 1591 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC103710.2-202ENST00000641454 2853 ntBASIC3.28□□□□□ -1.88
EBF3Q9H4W6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EBF3Q9H4W6 AC010733.2-201ENST00000589496 5702 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 Y_RNA.47-201ENST00000362697 108 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 RNU6-890P-201ENST00000384121 107 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 Y_RNA.463-201ENST00000384271 102 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 Y_RNA.496-201ENST00000384444 101 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 BTF3P15-201ENST00000455606 336 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 SCARNA18-201ENST00000459004 134 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC097462.2-201ENST00000504623 481 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC008526.1-201ENST00000509149 338 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 RNU6-976P-201ENST00000516086 111 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 RNU6-764P-201ENST00000516396 105 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC009812.2-201ENST00000517657 457 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AP004371.1-201ENST00000525240 214 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC008521.1-201ENST00000587471 187 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AL033523.1-201ENST00000605153 153 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC022418.1-201ENST00000624118 445 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC093831.2-201ENST00000624393 3427 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 AC116096.1-201ENST00000566804 2314 ntBASIC3.27□□□□□ -1.89
EBF3Q9H4W6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
EBF3Q9H4W6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
EBF3Q9H4W6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
EBF3Q9H4W6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
EBF3Q9H4W6 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms