Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.14□□□□□ -2.07
NXF3Q9H4D5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.14□□□□□ -2.07
NXF3Q9H4D5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC073343.1-201ENST00000328239 651 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 Y_RNA.51-201ENST00000362725 102 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 RNY1P12-201ENST00000364251 105 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 RNU6-169P-201ENST00000365336 107 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 RNU6-195P-201ENST00000411352 109 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 CDK8P2-201ENST00000415020 547 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 C1DP2-201ENST00000418167 426 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 MORF4L1P6-201ENST00000418771 268 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AL365338.1-201ENST00000422282 858 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 ISCA1P1-201ENST00000426679 387 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC007560.1-201ENST00000426912 237 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 ISCA1P6-201ENST00000427740 390 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 HMGB1P27-201ENST00000431429 603 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 RPS24P1-201ENST00000438550 371 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC073614.1-201ENST00000438690 650 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 FABP5P13-201ENST00000452144 328 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 MTAPP1-201ENST00000489154 819 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC007182.2-201ENST00000489251 402 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 SNORD19.2-201ENST00000516978 73 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AK6P1-201ENST00000540219 478 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC087883.1-201ENST00000551882 391 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC110588.1-201ENST00000559699 137 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AL121917.1-203ENST00000605534 577 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AL365204.3-201ENST00000612448 685 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC244517.12-201ENST00000623581 663 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 MIR7157-201ENST00000635801 60 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.13□□□□□ -2.07
NXF3Q9H4D5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NXF3Q9H4D5 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 UBE2L2-201ENST00000254302 429 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 RNU6-39P-201ENST00000384344 107 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 MIR558-201ENST00000384920 94 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 BTF3L4P3-201ENST00000418879 476 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 BPY2DP-201ENST00000422208 265 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC104651.1-201ENST00000427559 735 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 MED13P1-201ENST00000428342 171 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 MICF-203ENST00000432679 129 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC003989.2-201ENST00000440224 169 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 FABP5P15-201ENST00000453566 214 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC098591.2-201ENST00000510152 315 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC090572.1-201ENST00000519251 160 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC024909.2-201ENST00000553035 286 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC007151.1-201ENST00000572774 483 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC245014.2-201ENST00000603689 287 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC009314.1-201ENST00000603871 304 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 MTND4LP5-201ENST00000605152 292 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC246785.4-201ENST00000605374 287 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC093783.1-201ENST00000612976 329 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC072046.2-201ENST00000618366 268 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AL589994.2-201ENST00000621124 579 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 MTND5P42-201ENST00000637720 498 ntBASIC2.12□□□□□ -2.07
NXF3Q9H4D5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.12□□□□□ -2.07
NXF3Q9H4D5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RNU6-188P-201ENST00000364207 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms