Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS16Q9H269 RNU6-256P-201ENST00000516747 97 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS16Q9H269 SNRPGP18-201ENST00000553000 214 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 AMZ2P1-203ENST00000565833 850 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 AC073657.2-201ENST00000605661 303 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS16Q9H269 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VPS16Q9H269 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
VPS16Q9H269 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
VPS16Q9H269 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS16Q9H269 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS16Q9H269 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS16Q9H269 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS16Q9H269 Y_RNA.459-201ENST00000384251 102 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 RNU6-574P-201ENST00000384265 107 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 RNU6-1127P-201ENST00000384580 107 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 RN7SKP27-201ENST00000410684 333 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 RNU2-68P-201ENST00000410878 191 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS16Q9H269 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 MTND1P17-201ENST00000448961 204 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 UQCRHP3-201ENST00000451503 251 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 CYCSP35-201ENST00000451978 304 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 MTCO3P10-201ENST00000455912 772 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 ELOCP24-201ENST00000456370 334 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 SCARNA18-201ENST00000459004 134 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC008155.2-201ENST00000464337 397 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AP002812.1-201ENST00000495378 474 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 RNU6-1137P-201ENST00000517073 99 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 RNU6-1315P-201ENST00000517187 99 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS16Q9H269 IMMP1LP2-201ENST00000552954 492 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS16Q9H269 MIR1273C-201ENST00000578669 77 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC023043.2-201ENST00000589678 1026 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC004805.2-201ENST00000605382 482 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AP000654.2-201ENST00000605633 586 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 FTX_3.1-201ENST00000610451 147 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC103705.1-201ENST00000619013 241 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 AC006111.3-201ENST00000622137 383 ntBASIC3.44□□□□□ -1.86
VPS16Q9H269 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS16Q9H269 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VPS16Q9H269 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VPS16Q9H269 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS16Q9H269 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS16Q9H269 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS16Q9H269 AC110774.1-201ENST00000623567 2018 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS16Q9H269 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS16Q9H269 FTLP6-201ENST00000355274 422 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 Y_RNA.212-201ENST00000364177 102 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 RNU6-1105P-201ENST00000384774 107 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AL356057.3-201ENST00000402607 340 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AL358176.2-201ENST00000425769 204 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 HIGD1AP11-201ENST00000438361 280 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 IPO7P1-201ENST00000442031 636 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS16Q9H269 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS16Q9H269 AC091179.1-201ENST00000461606 579 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS16Q9H269 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS16Q9H269 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS16Q9H269 PTP4A1P4-201ENST00000512479 322 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 RNA5SP165-201ENST00000517142 115 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS16Q9H269 AP003122.3-201ENST00000526316 255 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AC084851.1-201ENST00000529105 249 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS16Q9H269 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS16Q9H269 MIR1254-2-201ENST00000579553 63 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS16Q9H269 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS16Q9H269 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS16Q9H269 HSPE1P7-201ENST00000604681 321 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 FAM157A-202ENST00000615155 405 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 AC099506.2-201ENST00000623074 221 ntBASIC3.43□□□□□ -1.86
VPS16Q9H269 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS16Q9H269 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS16Q9H269 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS16Q9H269 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS16Q9H269 Y_RNA.28-201ENST00000362554 111 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 Y_RNA.135-201ENST00000363439 95 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS16Q9H269 RNU6-639P-201ENST00000384074 107 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 RNU6-463P-201ENST00000384340 107 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 MIR449B-201ENST00000384995 97 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 EIF4E2P1-201ENST00000393781 255 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms