Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.16□□□□□ -1.9
CDT1Q9H211 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.16□□□□□ -1.9
CDT1Q9H211 AL512844.2-201ENST00000433990 593 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 RPS3AP52-201ENST00000435639 297 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 MTCYBP6-201ENST00000441810 138 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 FABP5P15-201ENST00000453566 214 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 SCARNA18-201ENST00000459004 134 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 RPL23AP14-201ENST00000468281 468 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
CDT1Q9H211 SNORA31.1-201ENST00000515993 133 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 SNORA31.5-201ENST00000516190 133 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.16□□□□□ -1.9
CDT1Q9H211 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 MTND4P7-201ENST00000523876 130 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AL137161.1-201ENST00000532231 390 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.16□□□□□ -1.9
CDT1Q9H211 AC107016.2-201ENST00000547968 190 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.16□□□□□ -1.9
CDT1Q9H211 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CDT1Q9H211 POLR3GP2-201ENST00000588366 668 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AC136601.2-201ENST00000604356 474 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AC113139.1-201ENST00000605049 239 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 Z82243.1-201ENST00000609432 473 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 uc_338.5-201ENST00000611839 155 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AC104237.2-201ENST00000612456 443 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AL160413.1-201ENST00000622780 310 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AC027309.3-201ENST00000623419 351 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
CDT1Q9H211 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 CUL1P1-201ENST00000509510 2425 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDT1Q9H211 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDT1Q9H211 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDT1Q9H211 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
CDT1Q9H211 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDT1Q9H211 Y_RNA.339-201ENST00000365325 102 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 RNU6-1227P-201ENST00000383981 107 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 Y_RNA.460-201ENST00000384255 102 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 RNU6-1127P-201ENST00000384580 107 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDT1Q9H211 SAR1AP2-201ENST00000392696 594 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.15□□□□□ -1.91
CDT1Q9H211 AC092047.1-201ENST00000424997 240 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AL591704.1-201ENST00000432574 275 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.15□□□□□ -1.91
CDT1Q9H211 UBE2DNL-203ENST00000474922 222 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 RPS15AP34-201ENST00000487776 387 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 HIGD1AP13-201ENST00000509878 289 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 RNU6-273P-201ENST00000516937 96 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.15□□□□□ -1.91
CDT1Q9H211 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.15□□□□□ -1.91
CDT1Q9H211 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.15□□□□□ -1.91
CDT1Q9H211 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.15□□□□□ -1.91
CDT1Q9H211 AC005498.1-201ENST00000592125 465 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
CDT1Q9H211 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.15□□□□□ -1.91
CDT1Q9H211 MIR6076-201ENST00000617521 113 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 AL359757.2-201ENST00000624309 274 ntBASIC3.15□□□□□ -1.91
CDT1Q9H211 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDT1Q9H211 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDT1Q9H211 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.14□□□□□ -1.91
CDT1Q9H211 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC103988.1-201ENST00000566382 2177 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDT1Q9H211 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDT1Q9H211 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDT1Q9H211 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 RNU6-715P-201ENST00000365204 103 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 SNORD70.1-201ENST00000391007 85 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC009161.1-201ENST00000417306 376 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AF228730.4-201ENST00000421457 183 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.14□□□□□ -1.91
CDT1Q9H211 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.14□□□□□ -1.91
CDT1Q9H211 RPS15AP27-201ENST00000449183 343 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 RNU6-1208P-201ENST00000459588 107 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 RN7SL75P-201ENST00000461926 281 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 RPL23AP11-201ENST00000475260 469 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC091885.1-201ENST00000506658 268 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 RNU6-864P-201ENST00000516256 108 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDT1Q9H211 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.14□□□□□ -1.91
CDT1Q9H211 MIR3672-201ENST00000584290 82 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC024153.1-201ENST00000603103 365 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC005034.5-201ENST00000604219 466 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 AC064836.2-201ENST00000609491 462 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDT1Q9H211 uc_338.15-201ENST00000615470 191 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 MTND4LP32-201ENST00000636111 270 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.14□□□□□ -1.91
CDT1Q9H211 ZNF826P-207ENST00000622273 1910 ntBASIC3.14□□□□□ -1.91
CDT1Q9H211 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
CDT1Q9H211 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.14□□□□□ -1.91
CDT1Q9H211 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDT1Q9H211 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDT1Q9H211 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDT1Q9H211 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms