Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU6-37P-201ENST00000362692 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-11P-201ENST00000364234 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-7-201ENST00000364784 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-8-201ENST00000365467 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-25P-201ENST00000383873 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-1-201ENST00000383898 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-48P-201ENST00000384161 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-36P-201ENST00000384172 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-4P-201ENST00000384205 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-5P-201ENST00000384238 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-3P-201ENST00000384314 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-16P-201ENST00000384385 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-15P-201ENST00000384534 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-2-201ENST00000384627 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-29P-201ENST00000384637 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-9-201ENST00000384776 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-33P-201ENST00000384793 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 SNORA69.1-201ENST00000390904 137 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-121P-201ENST00000410525 99 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AC007098.1-201ENST00000420122 367 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AL139247.1-201ENST00000422768 325 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 PIGPP3-201ENST00000425307 415 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AL159987.2-201ENST00000432754 307 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AL513043.1-201ENST00000439124 535 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 HMGB1P37-201ENST00000439613 609 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RPL9P9-202ENST00000466501 579 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AC133134.1-201ENST00000466800 359 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AC098869.1-201ENST00000481627 292 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 APOOP4-201ENST00000513530 597 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 MIR892C-201ENST00000516410 77 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 ATP5F1P5-201ENST00000526403 760 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 ZNF192P1-203ENST00000565888 810 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RNU6-6P-201ENST00000606623 107 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 AC098479.1-201ENST00000609225 154 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 ZNF962P-201ENST00000443465 3140 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RNU6-212P-201ENST00000362642 104 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RNU1-35P-201ENST00000362782 153 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RNU6-200P-201ENST00000364743 107 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RNU6-1197P-201ENST00000391183 107 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AL591034.2-201ENST00000402839 359 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 MIR548M-201ENST00000408260 86 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RNU6-130P-201ENST00000411112 103 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 Z85995.1-201ENST00000415547 335 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 MTCO3P19-201ENST00000415864 321 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AL590135.1-201ENST00000422215 156 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RPL7P5-201ENST00000471472 736 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 HMGN1P11-201ENST00000508668 303 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RNU6-143P-201ENST00000516942 93 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 RN7SKP40-201ENST00000517211 242 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC109329.1-201ENST00000518744 317 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC022695.1-201ENST00000522089 237 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AL157871.3-201ENST00000557231 293 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC006557.5-201ENST00000603126 811 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC009314.1-201ENST00000603871 304 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC010900.2-201ENST00000604508 210 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 AC012603.1-201ENST00000606424 528 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 ZNF299P-201ENST00000406845 1804 ntBASIC4.02□□□□□ -1.77
RNF38Q9H0F5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF38Q9H0F5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 SNORA71.3-201ENST00000362582 128 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 RNU6-700P-201ENST00000391043 107 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 RNU2-33P-201ENST00000410344 192 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AC139712.2-201ENST00000424302 339 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AC007919.1-201ENST00000429380 217 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 NDUFB4P6-201ENST00000436819 366 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 RPEP5-201ENST00000441137 268 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AL139109.1-201ENST00000455491 297 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 RNA5SP291-201ENST00000517222 105 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AC034114.1-201ENST00000520293 285 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms