Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MIR410-201ENST00000362222 80 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 Y_RNA.418-201ENST00000384029 102 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 RNA5SP87-201ENST00000384155 118 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 MIR548I2-201ENST00000408348 149 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 SETP5-201ENST00000437270 562 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AC012671.1-201ENST00000451912 203 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 RPS29P33-201ENST00000456717 146 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 Y_RNA.638-201ENST00000459374 113 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-58P-201ENST00000517143 103 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 IGKV1-32-201ENST00000519290 311 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AC005255.1-201ENST00000593748 216 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RN7SKP280-201ENST00000364196 304 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 Y_RNA.230-201ENST00000364348 109 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 Y_RNA.331-201ENST00000365267 102 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MIR329-1-201ENST00000385028 80 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MIR888-201ENST00000401186 77 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MIR298-201ENST00000401212 88 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-651P-201ENST00000411040 105 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AL590139.1-201ENST00000416267 400 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 VDAC1P3-201ENST00000434069 851 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AC007969.2-201ENST00000441891 191 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AC007395.1-201ENST00000451333 677 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RPS26P28-201ENST00000470806 348 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RN7SL481P-201ENST00000477764 299 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RPS4XP22-201ENST00000480755 780 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AP001025.1-201ENST00000486139 332 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 SNORA40.9-201ENST00000515895 93 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 RAB9BP1-201ENST00000519581 626 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 CR383656.8-201ENST00000549046 145 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MIR5571-201ENST00000577998 113 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MIR4270-201ENST00000581799 70 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MIR4697-201ENST00000582977 78 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AC005176.2-201ENST00000596933 147 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AL138721.1-201ENST00000616756 179 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AC007546.2-201ENST00000623996 360 ntBASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BHLHE41Q9C0J9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AC027290.2-201ENST00000623210 18662 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-1141P-201ENST00000364520 107 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-1280P-201ENST00000365211 107 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RNA5SP240-201ENST00000365355 128 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 MIR487A-201ENST00000385009 80 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 FTH1P15-201ENST00000406984 280 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AL732292.1-201ENST00000426692 226 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RPS12P10-201ENST00000427031 377 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RPL23AP93-201ENST00000440847 484 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AC078817.1-201ENST00000492623 435 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AC015795.1-201ENST00000513669 327 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RNA5SP497-201ENST00000516081 97 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AL391261.3-201ENST00000557194 520 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 RPL23AP97-201ENST00000568955 471 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 MIR7154-201ENST00000620673 73 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 AC021753.1-201ENST00000635724 168 ntBASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.24□□□□□ -1.73
BHLHE41Q9C0J9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms