Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AC087883.1-201ENST00000551882 391 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 MIR3682-201ENST00000581338 84 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AF038458.1-201ENST00000588406 262 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AC080078.2-201ENST00000603766 501 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AL391646.1-201ENST00000603860 190 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 MIR98-201ENST00000606724 119 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AC090132.2-201ENST00000615881 347 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AC010378.1-201ENST00000619270 362 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 OR5AK4P-201ENST00000635912 903 ntBASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RSPO3Q9BXY4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 SNORD56.2-201ENST00000363242 71 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 RNU5E-6P-201ENST00000365574 115 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 RNU6-1215P-201ENST00000384441 102 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 GSTA9P-201ENST00000406231 611 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.619-201ENST00000410951 90 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 UBE2V1P10-201ENST00000414685 269 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC114491.1-201ENST00000416095 246 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AL353193.1-201ENST00000421444 268 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC098614.2-201ENST00000426040 255 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC119618.1-201ENST00000434191 222 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 DPPA3P1-201ENST00000448050 469 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 RPS15AP27-201ENST00000449183 343 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 snoU13.28-201ENST00000459235 104 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 MTCO2P29-201ENST00000465212 189 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 RPS3AP17-201ENST00000472594 777 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 RPL31P60-201ENST00000478450 367 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 RPS27P21-201ENST00000486977 252 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AL049874.1-201ENST00000489560 388 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 BTF3P12-201ENST00000519620 469 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 CASP1P1-201ENST00000526345 212 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AL391840.1-201ENST00000571144 367 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 NRBF2P1-201ENST00000587407 859 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 DEFB131E-202ENST00000602581 683 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC245014.2-201ENST00000603689 287 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 DPPA3P3-201ENST00000603842 430 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC246785.4-201ENST00000605374 287 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AL121992.2-201ENST00000606262 256 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC092954.2-201ENST00000609103 430 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC010133.1-201ENST00000615809 842 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC072046.2-201ENST00000618366 268 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC068792.1-201ENST00000621354 417 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC124864.2-201ENST00000624736 186 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 AC099654.12-201ENST00000639868 649 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 OR4G2P-202ENST00000641004 1759 ntBASIC1.89□□□□□ -2.11
RSPO3Q9BXY4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 DEFB108F-201ENST00000344638 222 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU6-223P-201ENST00000362830 107 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 SNORA38-201ENST00000363946 132 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 SNORA3A-201ENST00000364113 130 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 SMIM11P1-201ENST00000369586 178 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.409-201ENST00000383990 98 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU6-701P-201ENST00000384059 107 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU5A-6P-201ENST00000384136 116 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU6-1103P-201ENST00000384150 107 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU6-74P-201ENST00000384235 107 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.554-201ENST00000384672 102 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 MIR1-2-201ENST00000384961 85 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 MIR514A1-201ENST00000385133 98 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU6-780P-201ENST00000391030 104 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AC068050.1-201ENST00000394891 380 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 CALM2P3-201ENST00000400429 449 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 TXNP7-201ENST00000406296 293 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU2-62P-201ENST00000410868 191 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 ELOCP4-201ENST00000420090 333 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 MTCO2P19-201ENST00000427513 598 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AC008850.1-201ENST00000427546 362 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AC133104.1-201ENST00000429100 218 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 MTATP6P16-201ENST00000434543 526 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms