Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 BTF3P15-201ENST00000455606 336 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AC104136.1-201ENST00000512969 394 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 MTCO2P24-201ENST00000515611 426 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 RNU6-1095P-201ENST00000516148 108 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 RN7SKP43-201ENST00000516173 320 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 RNU6-264P-201ENST00000517134 104 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AP003122.3-201ENST00000526316 255 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 MIR4680-201ENST00000580906 66 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 MIR4503-201ENST00000582187 83 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 MIR5692C1-201ENST00000585309 91 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 7SK.7-201ENST00000603504 247 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AL670379.4-201ENST00000605279 254 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AL359547.2-201ENST00000615810 418 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 AL669831.3-213ENST00000636676 183 ntBASIC3.69□□□□□ -1.82
SALL3Q9BXA9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SALL3Q9BXA9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AL049641.1-201ENST00000441055 1948 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 SNORA75B-201ENST00000384053 137 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 MIR568-201ENST00000385036 95 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 RNU6-1106P-201ENST00000390845 107 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 MRPL42P3-201ENST00000401492 326 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 MIR548F4-201ENST00000408515 105 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC009310.1-201ENST00000414414 451 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC092447.6-201ENST00000414578 210 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 MTCYBP9-201ENST00000431021 303 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 RPS29P6-201ENST00000438196 145 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC006028.1-201ENST00000438379 402 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 MTND2P29-201ENST00000438595 412 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 SUMO1P3-201ENST00000439961 304 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AL049873.1-201ENST00000480540 376 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC116337.1-201ENST00000509680 687 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 RNU2-69P-201ENST00000516061 100 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 RNU6-1016P-201ENST00000516689 94 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC104763.2-201ENST00000604179 382 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AL442067.1-201ENST00000613261 223 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 MIR6852-201ENST00000621699 66 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 AC022418.1-201ENST00000624118 445 ntBASIC3.68□□□□□ -1.82
SALL3Q9BXA9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC007256.1-201ENST00000392253 2765 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC004925.1-201ENST00000624256 2706 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 KPNA2P1-201ENST00000458289 1591 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 MIR22-201ENST00000362190 85 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 RNU6-1249P-201ENST00000363237 111 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 MCFD2P1-201ENST00000417812 300 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AL137014.1-201ENST00000420490 1226 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 NUP35P1-201ENST00000422734 947 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC104058.1-201ENST00000448028 297 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 RPL21P41-201ENST00000459863 264 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 RNU6-123P-201ENST00000516163 102 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 SNORA31.20-201ENST00000517111 133 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 RNU6-794P-201ENST00000517261 64 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AP006587.4-201ENST00000526053 529 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 COX6CP5-201ENST00000527162 228 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AL121603.1-201ENST00000553815 142 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 MIR3149-201ENST00000584629 83 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.67□□□□□ -1.82
SALL3Q9BXA9 DUSP12P1-201ENST00000612874 516 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 AC004696.1-201ENST00000614345 607 ntBASIC3.67□□□□□ -1.82
SALL3Q9BXA9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 537.3 ms