Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC022893.3-201ENST00000607665 437 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 MIR6134-201ENST00000617606 109 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AL445523.1-201ENST00000451184 1362 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 RNU6-1280P-201ENST00000365211 107 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.534-201ENST00000384599 112 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 MIR499A-201ENST00000384903 122 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 CYCSP48-201ENST00000417124 323 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL591704.1-201ENST00000432574 275 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL591212.2-201ENST00000433923 257 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 SSXP1-201ENST00000453640 473 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL139824.2-201ENST00000458731 1095 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 DYNLL1P5-201ENST00000467158 270 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL163540.1-201ENST00000485382 386 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC112204.1-201ENST00000502591 103 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC116655.1-201ENST00000508324 901 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AF131216.2-201ENST00000512316 564 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC174048.1-201ENST00000603389 144 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL670379.10-201ENST00000604330 253 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL670379.2-201ENST00000604983 252 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL670379.4-201ENST00000605279 254 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL670379.9-201ENST00000605428 253 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AC130324.3-201ENST00000614165 542 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 AL391262.2-201ENST00000622466 494 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 TEX21P-201ENST00000447107 1476 ntBASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP1Q9BWH6 RNU6-501P-201ENST00000364072 100 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 RNA5SP125-201ENST00000364843 120 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 SNORA72.3-201ENST00000365074 132 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 RNU6-946P-201ENST00000383878 107 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 SNORD115.1-201ENST00000391109 76 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AP1B1P2-201ENST00000416196 106 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 RPS15AP12-201ENST00000419498 388 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC007560.1-201ENST00000426912 237 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AL512286.1-201ENST00000439244 400 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 RNU6-914P-201ENST00000516749 109 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 RNU2-44P-201ENST00000516795 194 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 RNU6-677P-201ENST00000516914 101 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AP001372.4-201ENST00000524889 472 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AL355816.2-201ENST00000610049 647 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 AC006927.3-201ENST00000638789 384 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 CDC27P3-201ENST00000635418 1910 ntBASIC2.13□□□□□ -2.07
RPAP1Q9BWH6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 RNU6-500P-201ENST00000362349 107 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 RNU6-533P-201ENST00000384144 107 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 SNORA46.1-201ENST00000391069 153 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 RPS3AP44-201ENST00000425466 790 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AL365184.2-201ENST00000431139 435 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AL441985.1-201ENST00000457727 251 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 RNA5SP112-201ENST00000515937 99 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AP005902.1-201ENST00000521358 186 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC011979.2-201ENST00000527568 352 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 SUB1P3-201ENST00000564581 315 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC105245.1-201ENST00000581934 244 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 MTCYBP22-201ENST00000603788 447 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC105129.3-201ENST00000605455 485 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC034229.4-201ENST00000607861 441 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AC025048.6-202ENST00000627667 438 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 AL354685.2-201ENST00000448218 1447 ntBASIC2.12□□□□□ -2.07
RPAP1Q9BWH6 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RNU6-486P-201ENST00000363116 107 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RNU6-898P-201ENST00000365627 104 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RNU6-748P-201ENST00000384648 107 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RNU4-62P-201ENST00000410125 130 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RPS15AP9-201ENST00000439856 381 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms