Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 BNIP3P16-201ENST00000589779 534 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.4□□□□□ -1.87
VRK1Q99986 AC022432.1-201ENST00000595739 310 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC078795.3-201ENST00000602913 472 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC024220.1-201ENST00000603675 484 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 MIR8058-201ENST00000615737 89 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AL591424.2-201ENST00000617023 128 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC092608.2-201ENST00000624427 218 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VRK1Q99986 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
VRK1Q99986 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.39□□□□□ -1.87
VRK1Q99986 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
VRK1Q99986 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VRK1Q99986 RNU6-1280P-201ENST00000365211 107 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 Y_RNA.445-201ENST00000384168 102 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 EI24P2-201ENST00000397776 1076 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC005300.1-201ENST00000428401 373 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC006946.1-201ENST00000429106 328 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.39□□□□□ -1.87
VRK1Q99986 AC124916.1-201ENST00000444020 547 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.39□□□□□ -1.87
VRK1Q99986 NIPA2P5-201ENST00000452282 464 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC096576.1-201ENST00000489014 359 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC090096.1-201ENST00000489168 390 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 RN7SL323P-201ENST00000494712 295 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 RNA5SP384-201ENST00000516615 116 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 RNU6-612P-201ENST00000516909 102 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC022634.1-201ENST00000520765 532 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 ELOCP31-201ENST00000540463 467 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC006199.1-201ENST00000548728 219 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 BNIP3P22-201ENST00000593399 556 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 MIR3976-201ENST00000606807 139 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC006133.1-201ENST00000617106 264 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 MIR3199-2-201ENST00000636243 86 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VRK1Q99986 ADAM3A-203ENST00000461344 2157 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.39□□□□□ -1.87
VRK1Q99986 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VRK1Q99986 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VRK1Q99986 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
VRK1Q99986 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VRK1Q99986 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
VRK1Q99986 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.38□□□□□ -1.87
VRK1Q99986 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
VRK1Q99986 RNU6-1115P-201ENST00000362490 106 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VRK1Q99986 RNU6-331P-201ENST00000384724 107 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 MIR30B-201ENST00000384850 88 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AC023141.4-201ENST00000412031 328 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VRK1Q99986 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK1Q99986 HMGN2P20-201ENST00000437531 273 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK1Q99986 AC011816.1-201ENST00000441346 546 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK1Q99986 RPL21P11-201ENST00000461458 483 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 RPS29P27-201ENST00000463711 170 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AC034236.1-201ENST00000469891 373 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 SMURF2P1-201ENST00000514992 481 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 SCARNA16.2-201ENST00000516520 172 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 Y_RNA.711-201ENST00000516993 102 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VRK1Q99986 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK1Q99986 MIR4429-201ENST00000580105 73 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AC011890.2-201ENST00000613393 294 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK1Q99986 AC090617.7-201ENST00000623952 126 ntBASIC3.38□□□□□ -1.87
VRK1Q99986 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VRK1Q99986 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
VRK1Q99986 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VRK1Q99986 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VRK1Q99986 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.38□□□□□ -1.87
VRK1Q99986 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.37□□□□□ -1.87
VRK1Q99986 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VRK1Q99986 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VRK1Q99986 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
VRK1Q99986 RNU6-490P-201ENST00000362985 107 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 MIR670-201ENST00000390142 98 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 RNA5SP252-201ENST00000391131 119 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 FTH1P15-201ENST00000406984 280 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 SNORA57.3-201ENST00000411095 141 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 EIF4EP2-201ENST00000422816 654 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.37□□□□□ -1.87
VRK1Q99986 MRPL42P6-201ENST00000486397 371 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms