Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPS29P26-201ENST00000477483 171 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 MRPL42P6-201ENST00000486397 371 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 MTAPP1-201ENST00000489154 819 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.35□□□□□ -2.03
SSX3Q99909 AC114781.4-201ENST00000513707 639 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 SNORA9.3-201ENST00000516383 129 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 RNU6-405P-201ENST00000516637 110 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AP003392.2-201ENST00000527269 208 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.35□□□□□ -2.03
SSX3Q99909 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.35□□□□□ -2.03
SSX3Q99909 MIR4703-201ENST00000577728 79 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 AC087683.1-201ENST00000591187 441 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AL670379.10-201ENST00000604330 253 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AL670379.9-201ENST00000605428 253 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 Z75746.1-201ENST00000440243 2080 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSX3Q99909 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.35□□□□□ -2.03
SSX3Q99909 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SSX3Q99909 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.34□□□□□ -2.03
SSX3Q99909 RPL9P7-201ENST00000330965 580 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 RNU6-1103P-201ENST00000384150 107 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SSX3Q99909 AL133475.1-201ENST00000404414 305 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 CIR1P3-201ENST00000405137 479 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.34□□□□□ -2.03
SSX3Q99909 AL353621.1-201ENST00000418219 243 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 PGBD4P6-201ENST00000421501 610 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 EIF4EP4-201ENST00000424916 578 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 RPS3AP44-201ENST00000425466 790 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.34□□□□□ -2.03
SSX3Q99909 AL451074.3-201ENST00000437709 472 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.34□□□□□ -2.03
SSX3Q99909 HIGD1AP2-201ENST00000446367 280 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.34□□□□□ -2.03
SSX3Q99909 RPL36AP48-201ENST00000485521 314 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC068781.1-201ENST00000488231 618 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 RPL22P13-201ENST00000493291 347 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.34□□□□□ -2.03
SSX3Q99909 HMGB1P29-201ENST00000505659 499 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC105313.1-201ENST00000509121 353 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 MTND3P25-201ENST00000509243 135 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.34□□□□□ -2.03
SSX3Q99909 AC104136.1-201ENST00000512969 394 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 RNU6-1178P-201ENST00000516674 107 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AP004607.1-201ENST00000524456 203 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AL133241.1-201ENST00000556832 487 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC091805.2-201ENST00000603848 235 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC007684.1-201ENST00000609671 477 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.34□□□□□ -2.03
SSX3Q99909 AC010378.1-201ENST00000619270 362 ntBASIC2.34□□□□□ -2.03
SSX3Q99909 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SSX3Q99909 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.04
SSX3Q99909 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.34□□□□□ -2.04
SSX3Q99909 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SSX3Q99909 RNU6-384P-201ENST00000364900 104 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 RNU6-45P-201ENST00000384471 107 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC003685.2-201ENST00000422795 395 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.33□□□□□ -2.04
SSX3Q99909 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX3Q99909 AC012308.1-201ENST00000451232 178 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX3Q99909 AC092436.1-201ENST00000506450 503 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC108078.1-201ENST00000508073 725 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC105417.1-201ENST00000514691 285 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 RNU1-86P-201ENST00000516108 154 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 RNU1-107P-201ENST00000516617 154 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC090136.1-201ENST00000520009 240 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX3Q99909 FAM92A1P1-201ENST00000528023 890 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC135279.1-201ENST00000543493 504 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SSX3Q99909 AC024909.2-201ENST00000553035 286 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC009063.1-201ENST00000563342 702 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX3Q99909 ELOCP29-201ENST00000588193 334 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SSX3Q99909 AC073539.2-201ENST00000597113 165 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC080013.6-201ENST00000606185 215 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX3Q99909 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
SSX3Q99909 SCARNA4-202ENST00000625402 129 ntBASIC2.33□□□□□ -2.04
SSX3Q99909 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SSX3Q99909 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSX3Q99909 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.32□□□□□ -2.04
SSX3Q99909 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSX3Q99909 AC138393.1-203ENST00000327086 343 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 MIR6073-201ENST00000352083 89 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 Y_RNA.1-201ENST00000352915 104 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 RNU6-715P-201ENST00000365204 103 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms