Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MTND3P1-201ENST00000441336 220 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.52□□□□□ -2.17
VAT1Q99536 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.52□□□□□ -2.17
VAT1Q99536 AL139824.2-201ENST00000458731 1095 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 SNORD97-201ENST00000459187 142 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.52□□□□□ -2.17
VAT1Q99536 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.52□□□□□ -2.17
VAT1Q99536 AC109927.2-201ENST00000506416 303 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.52□□□□□ -2.17
VAT1Q99536 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.52□□□□□ -2.17
VAT1Q99536 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VAT1Q99536 AL157871.3-201ENST00000557231 293 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 AC093249.1-201ENST00000567049 203 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 MIR1273C-201ENST00000578669 77 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 MIR3146-201ENST00000580367 79 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.52□□□□□ -2.17
VAT1Q99536 AC073410.2-201ENST00000603240 332 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 AC093788.1-201ENST00000609356 927 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 AC130324.3-201ENST00000614165 542 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 AC241585.2-209ENST00000638217 143 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
VAT1Q99536 RBBP8P1-201ENST00000449447 1844 ntBASIC1.52□□□□□ -2.17
VAT1Q99536 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.51□□□□□ -2.17
VAT1Q99536 RNU6-858P-201ENST00000362436 107 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 SNORD115-3-201ENST00000363100 82 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 RNU4-68P-201ENST00000364314 141 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VAT1Q99536 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AC138623.1-201ENST00000418060 216 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AL513185.2-201ENST00000425543 193 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.51□□□□□ -2.17
VAT1Q99536 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.51□□□□□ -2.17
VAT1Q99536 MED28P2-201ENST00000475771 317 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.51□□□□□ -2.17
VAT1Q99536 RNU2-53P-201ENST00000516257 147 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 RNU6-548P-201ENST00000517083 115 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.51□□□□□ -2.17
VAT1Q99536 AC023050.2-201ENST00000544968 387 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 MTCYBP23-201ENST00000558717 1102 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.51□□□□□ -2.17
VAT1Q99536 CLIC4P2-201ENST00000601934 717 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AL391001.1-201ENST00000602747 715 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AP000860.1-201ENST00000605250 559 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AC098614.4-201ENST00000607601 462 ntBASIC1.51□□□□□ -2.17
VAT1Q99536 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.51□□□□□ -2.17
VAT1Q99536 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
VAT1Q99536 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.51□□□□□ -2.17
VAT1Q99536 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VAT1Q99536 Y_RNA.33-201ENST00000362591 102 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 RNU6-1010P-201ENST00000362757 107 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 RNU4-92P-201ENST00000363783 136 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 SNORA75B-201ENST00000384053 137 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 MIR186-201ENST00000384988 86 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.5□□□□□ -2.17
VAT1Q99536 AC092809.3-201ENST00000415453 231 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.5□□□□□ -2.17
VAT1Q99536 TOMM20P4-201ENST00000427861 435 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.5□□□□□ -2.17
VAT1Q99536 MTND2P29-201ENST00000438595 412 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC003071.1-201ENST00000451219 789 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC093899.1-201ENST00000457984 376 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.5□□□□□ -2.17
VAT1Q99536 RNU6-677P-201ENST00000516914 101 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC092325.1-201ENST00000566449 554 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.5□□□□□ -2.17
VAT1Q99536 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.5□□□□□ -2.17
VAT1Q99536 AL158042.1-201ENST00000605338 460 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC108747.1-201ENST00000609508 535 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 AC092656.1-203ENST00000624134 423 ntBASIC1.5□□□□□ -2.17
VAT1Q99536 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VAT1Q99536 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VAT1Q99536 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.5□□□□□ -2.17
VAT1Q99536 Y_RNA.46-201ENST00000362695 102 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 RNU6-511P-201ENST00000363496 107 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 RNU5E-6P-201ENST00000365574 115 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 RNU6-1242P-201ENST00000391052 103 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.49□□□□□ -2.17
VAT1Q99536 RPL23AP35-201ENST00000451906 501 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.49□□□□□ -2.17
VAT1Q99536 AC134050.1-201ENST00000495088 933 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 AC104685.1-201ENST00000502445 371 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
VAT1Q99536 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.49□□□□□ -2.17
VAT1Q99536 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.49□□□□□ -2.17
VAT1Q99536 AC109329.1-201ENST00000518744 317 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 AP004607.1-201ENST00000524456 203 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 DUXAP5-201ENST00000529668 529 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.49□□□□□ -2.17
VAT1Q99536 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.49□□□□□ -2.17
VAT1Q99536 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.49□□□□□ -2.17
VAT1Q99536 BNIP3P25-201ENST00000596023 559 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms