Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC134026.1-201ENST00000623249 2239 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHOX2BQ99453 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHOX2BQ99453 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 AC068254.2-201ENST00000623938 3577 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHOX2BQ99453 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PHOX2BQ99453 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PHOX2BQ99453 RNU6-801P-201ENST00000364087 105 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 RNU6-818P-201ENST00000364837 108 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 SNORA70F-201ENST00000384142 135 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 MIR129-1-201ENST00000384972 72 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 CTSL3P-202ENST00000412179 788 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 RPEP3-201ENST00000425462 676 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 RNU6-1211P-201ENST00000459179 105 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 AC091179.1-201ENST00000461606 579 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 RN7SL542P-201ENST00000467147 294 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 RN7SL319P-201ENST00000480656 221 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 AC006199.1-201ENST00000548728 219 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHOX2BQ99453 SNORD11B-201ENST00000607707 90 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 AL391903.3-201ENST00000612158 163 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 AL354798.1-201ENST00000622505 329 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 AC008873.1-201ENST00000625051 138 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 AC083899.1-201ENST00000454465 3819 ntBASIC5.12□□□□□ -1.59
PHOX2BQ99453 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.12□□□□□ -1.59
PHOX2BQ99453 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC004944.1-201ENST00000517807 3059 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHOX2BQ99453 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 SNORD46.1-201ENST00000364139 104 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 MIR616-201ENST00000385293 97 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 MIR526A2-201ENST00000390198 65 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC079168.2-201ENST00000453977 416 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC092754.1-201ENST00000472975 479 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC006517.1-201ENST00000480485 328 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC005921.1-201ENST00000510589 286 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC011471.1-201ENST00000585766 187 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 AL391261.4-201ENST00000616012 481 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.11□□□□□ -1.59
PHOX2BQ99453 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHOX2BQ99453 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHOX2BQ99453 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PHOX2BQ99453 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PHOX2BQ99453 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHOX2BQ99453 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHOX2BQ99453 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHOX2BQ99453 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHOX2BQ99453 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHOX2BQ99453 AL590240.1-201ENST00000334118 313 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 SNORA72.4-201ENST00000384174 132 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 SNORD37.2-201ENST00000391075 66 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 CBX3P9-201ENST00000402326 552 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 RNA5SP129-201ENST00000410276 118 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 YPEL5P1-201ENST00000419731 367 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 AL714022.1-201ENST00000439897 151 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 AL591473.1-201ENST00000464297 313 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 AC107626.1-201ENST00000471084 183 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 AC026726.1-201ENST00000512859 601 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 DEFB131C-201ENST00000528817 165 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 AC112693.2-201ENST00000556538 232 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 MIR3138-201ENST00000585238 82 ntBASIC5.1□□□□□ -1.59
PHOX2BQ99453 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.1□□□□□ -1.59
PHOX2BQ99453 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PHOX2BQ99453 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHOX2BQ99453 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms