Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC104332.1-201ENST00000440471 797 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AL121871.1-201ENST00000443413 436 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AL590399.6-201ENST00000446396 307 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU7-138P-201ENST00000459479 64 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC106707.2-201ENST00000484182 374 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC113155.1-201ENST00000511141 769 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC109329.1-201ENST00000518744 317 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR4444-1-201ENST00000581696 74 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR4444-2-201ENST00000584390 74 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC010620.2-201ENST00000600135 313 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC116096.1-201ENST00000566804 2314 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.29-201ENST00000362570 113 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.269-201ENST00000364685 89 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.277-201ENST00000364754 102 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.478-201ENST00000384358 107 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-1203P-201ENST00000410703 110 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL31P2-201ENST00000413849 377 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 CYCSP4-201ENST00000429682 331 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC092423.1-201ENST00000430165 186 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC093852.1-201ENST00000503587 266 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 DEFB108E-201ENST00000524692 240 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 CR383656.7-201ENST00000548164 174 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AMZ2P1-203ENST00000565833 850 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 VN1R91P-201ENST00000594377 169 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC006557.5-201ENST00000603126 811 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC007566.2-201ENST00000603642 413 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AL160281.1-201ENST00000605307 311 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC007998.5-201ENST00000622938 237 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AC127459.3-201ENST00000624328 466 ntBASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP1Q96SZ6 AL359893.1-201ENST00000447628 1580 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.16-201ENST00000362421 102 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 snoU2_19.2-201ENST00000363024 80 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-263P-201ENST00000363811 107 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-371P-201ENST00000364283 108 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.291-201ENST00000364886 113 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 SNORA73.2-201ENST00000364946 201 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR578-201ENST00000384828 96 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU4-65P-201ENST00000410473 140 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-325P-201ENST00000411132 105 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AL030996.1-201ENST00000411430 235 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AC099677.1-201ENST00000420575 175 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 HSPD1P21-201ENST00000436541 245 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RPEP5-201ENST00000441137 268 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 HMGB1P25-201ENST00000468402 607 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AC104619.4-201ENST00000510773 249 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 RN7SKP60-201ENST00000516985 239 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AC022868.1-201ENST00000517767 391 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR4273-201ENST00000582824 84 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AL390123.1-201ENST00000603216 237 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AC123912.5-201ENST00000605470 343 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 BRDTP1-201ENST00000605735 677 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 U3.45-201ENST00000607547 219 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR92B-201ENST00000607575 96 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AP003355.3-201ENST00000623465 114 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 AC009093.8-201ENST00000641769 292 ntBASIC3.8□□□□□ -1.8
CDK5RAP1Q96SZ6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU4-50P-201ENST00000364361 141 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-339P-201ENST00000384310 107 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.506-201ENST00000384494 102 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR670-201ENST00000390142 98 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 RPS29P4-201ENST00000414733 161 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms