Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 SNORD114-19-201ENST00000363072 75 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 Y_RNA.99-201ENST00000363138 105 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RNU6-97P-201ENST00000363387 104 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RNU6-112P-201ENST00000363599 104 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RNU6-650P-201ENST00000365658 111 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 FTH1P15-201ENST00000406984 280 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RPL21P90-201ENST00000415692 466 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RPS6P15-201ENST00000431996 751 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 GTF2IP3-201ENST00000433887 494 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 MTND2P4-201ENST00000445034 1004 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC023194.1-201ENST00000493084 308 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC026414.1-201ENST00000504046 698 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RPL23AP94-201ENST00000512518 302 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 RNU2-53P-201ENST00000516257 147 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC087441.2-201ENST00000529141 262 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 SNRPGP1-201ENST00000553864 222 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC100814.1-201ENST00000606963 623 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AL357080.1-201ENST00000617394 239 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 AC241585.2-209ENST00000638217 143 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 RNU6-529P-201ENST00000363383 104 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 RNU6-743P-201ENST00000364151 106 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 SNORD114-6-201ENST00000364393 72 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 SNORA29-201ENST00000384183 140 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 RNU6-296P-201ENST00000384608 107 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC119751.3-201ENST00000399720 670 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 MTND1P21-201ENST00000412991 285 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 EIF1P1-201ENST00000421436 341 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 ZFAND6P1-201ENST00000434138 605 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 UBE2V1P8-201ENST00000437166 265 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 RPL7P55-201ENST00000450522 746 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 OR2AQ1P-201ENST00000451972 200 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 RPL31P3-201ENST00000458430 332 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC104629.1-201ENST00000494226 508 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC093809.1-201ENST00000509155 340 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC110760.3-202ENST00000515177 371 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 RN7SKP258-201ENST00000517151 304 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AP006587.4-201ENST00000526053 529 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AL391813.2-201ENST00000609113 322 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 AC099654.9-201ENST00000637055 678 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 FARSBP1-201ENST00000435808 1778 ntBASIC0.69□□□□□ -2.3
AP1S3Q96PC3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 RNU6-707P-201ENST00000364647 95 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 Y_RNA.408-201ENST00000383987 102 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 RNU6-968P-201ENST00000384076 107 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 RNU6-432P-201ENST00000384196 109 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 MIR186-201ENST00000384988 86 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 RNU4-62P-201ENST00000410125 130 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 MTCYBP15-201ENST00000433123 1127 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 BRK1P2-201ENST00000442875 223 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AL096829.2-201ENST00000446582 742 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 MTND1P31-201ENST00000449206 961 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 MTND1P9-201ENST00000453775 944 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC114981.1-201ENST00000503897 678 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC019176.1-201ENST00000518519 225 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC018630.3-201ENST00000542637 96 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC025678.1-201ENST00000567861 338 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AL353997.4-201ENST00000586196 166 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.68□□□□□ -2.3
AP1S3Q96PC3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AL157770.1-201ENST00000623049 439 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 MIR1248-201ENST00000629190 106 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 AC008993.2-201ENST00000631744 806 ntBASIC0.68□□□□□ -2.3
AP1S3Q96PC3 Y_RNA.40-201ENST00000362645 93 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 SNORD33-201ENST00000362761 85 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 RNU6-223P-201ENST00000362830 107 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms