Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC073063.1-201ENST00000434352 607 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 RNA5SP310-201ENST00000459084 116 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 RPL21P41-201ENST00000459863 264 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 RPL37P6-201ENST00000460682 294 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 SNORA31.3-201ENST00000516029 96 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 SNORA40.14-201ENST00000516543 86 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC104576.1-201ENST00000524225 88 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 MIR5188-201ENST00000583467 113 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AL138825.1-201ENST00000618587 192 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AL034408.1-202ENST00000636088 415 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AC008669.1-201ENST00000565823 2178 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RNU6-288P-201ENST00000363690 104 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RNU4-42P-201ENST00000364738 142 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RNU6-882P-201ENST00000391025 103 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RPL21P17-201ENST00000397467 475 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AL138885.1-201ENST00000405921 675 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RN7SKP53-201ENST00000411337 315 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AL139247.1-201ENST00000422768 325 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 SNORD127-201ENST00000458892 86 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RNU6-953P-201ENST00000459154 107 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RPL7P49-201ENST00000471402 708 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC011005.2-201ENST00000487324 359 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RPL17P19-201ENST00000489069 552 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC069499.1-201ENST00000489433 509 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 VN1R104P-201ENST00000505115 1009 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 MTND1P19-201ENST00000511780 315 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 RN7SKP258-201ENST00000517151 304 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC040926.1-201ENST00000530195 238 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AP000889.1-201ENST00000530968 660 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 OR4H12P-201ENST00000556269 907 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 MIR15A-201ENST00000607334 83 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 MIR486-1-201ENST00000612171 68 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC002076.2-201ENST00000617362 122 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 AC012314.7-201ENST00000619693 93 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
ZNF48Q96MX3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC010615.1-201ENST00000594254 1764 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 RNU6-596P-201ENST00000365395 98 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.577-201ENST00000384794 101 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 MIR7-3-201ENST00000384898 110 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 RNU6-174P-201ENST00000410406 106 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AL591419.1-201ENST00000427423 339 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AL353997.1-201ENST00000432936 108 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 HMGB1P37-201ENST00000439613 609 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AL360271.2-201ENST00000447710 161 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC108860.1-201ENST00000484521 383 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC018437.1-201ENST00000492214 406 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC022447.4-201ENST00000504053 364 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC026726.1-201ENST00000512859 601 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 RNU6-711P-201ENST00000517255 106 ntBASIC3.13□□□□□ -1.91
ZNF48Q96MX3 AC069113.1-201ENST00000517763 267 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms