Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC7Q96M83 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC7Q96M83 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC7Q96M83 RNU6-960P-201ENST00000364056 120 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 RNU6-946P-201ENST00000383878 107 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 MIR499A-201ENST00000384903 122 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL031577.2-201ENST00000404133 280 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 Z99497.1-201ENST00000421282 135 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC7Q96M83 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL133217.1-201ENST00000450980 425 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL139824.2-201ENST00000458731 1095 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 MTND1P22-201ENST00000510572 951 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 TRMT112P2-201ENST00000512910 132 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 RNU7-51P-201ENST00000516560 62 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC006199.1-201ENST00000548728 219 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL121821.2-201ENST00000556081 394 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 ANP32BP3-201ENST00000559213 706 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 ROCK1P1-201ENST00000573767 549 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC024614.2-201ENST00000577584 372 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC112191.3-201ENST00000604371 277 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC138749.5-201ENST00000611461 208 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL589743.7-201ENST00000612637 233 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC116165.2-201ENST00000616705 206 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 SNORD56.2-201ENST00000363242 71 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 RNU6-1083P-201ENST00000384022 107 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 RNU6-1328P-201ENST00000410938 106 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC007283.2-201ENST00000424739 197 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC137499.1-201ENST00000427602 88 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL161651.1-201ENST00000440882 223 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 PPP1R2P5-201ENST00000457256 603 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL121769.1-201ENST00000469473 401 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC026801.1-201ENST00000497178 464 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 NDUFB4P2-201ENST00000509515 391 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 Y_RNA.717-201ENST00000517106 92 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC106038.2-201ENST00000520706 568 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC022878.1-201ENST00000530684 149 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 MIR3618-201ENST00000580330 88 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC7Q96M83 AL391813.1-201ENST00000603098 260 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC092354.1-201ENST00000606057 376 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC135507.1-201ENST00000607214 561 ntBASIC2.36□□□□□ -2.03
CCDC7Q96M83 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 RNU6-190P-201ENST00000384154 102 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 Y_RNA.508-201ENST00000384502 114 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 MIR301A-201ENST00000385261 86 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 RNU4-72P-201ENST00000410754 173 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 AL589872.1-201ENST00000426602 288 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 SNORA31.6-201ENST00000516241 130 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 RNU6-914P-201ENST00000516749 109 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 SNORD19.2-201ENST00000516978 73 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 RNU6-1183P-201ENST00000517054 60 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 BTF3P12-201ENST00000519620 469 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 AC084851.1-201ENST00000529105 249 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 AP003122.4-201ENST00000530980 758 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 HMGN1P30-201ENST00000589286 268 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 MIR502-201ENST00000606349 86 ntBASIC2.35□□□□□ -2.03
CCDC7Q96M83 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC7Q96M83 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC7Q96M83 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC7Q96M83 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC7Q96M83 Y_RNA.796-201ENST00000364268 102 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 Y_RNA.799-201ENST00000364992 102 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 SNORA4.3-201ENST00000365564 137 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 Z98749.2-208ENST00000381646 500 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 RNU5A-2P-201ENST00000384337 116 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 AC092809.3-201ENST00000415453 231 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 AL365203.2-201ENST00000423444 196 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 BRK1P2-201ENST00000442875 223 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 ART2BP-201ENST00000453501 499 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 RNU6-581P-201ENST00000516214 105 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 Y_RNA.689-201ENST00000516589 107 ntBASIC2.34□□□□□ -2.04
CCDC7Q96M83 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
CCDC7Q96M83 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC7Q96M83 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms