Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.675-201ENST00000516389 149 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.691-201ENST00000516611 103 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AC138761.3-201ENST00000579993 334 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 OR1M4P-201ENST00000589199 287 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AC023043.2-201ENST00000589678 1026 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL670379.10-201ENST00000604330 253 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL670379.9-201ENST00000605428 253 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 MIR92B-201ENST00000607575 96 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL138726.1-201ENST00000614873 333 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CDK5RAP3Q96JB5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDK5RAP3Q96JB5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 SNORD116-11-201ENST00000383882 92 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 RPL5P18-201ENST00000406671 891 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AL714022.1-201ENST00000439897 151 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AL359672.1-201ENST00000442302 409 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC233279.1-201ENST00000455300 423 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 MTND4P17-201ENST00000470444 350 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 RPL7P49-201ENST00000471402 708 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 MTCO1P29-201ENST00000496868 288 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 RNA5SP454-201ENST00000517231 127 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 COPS8P3-201ENST00000526024 482 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AL391261.3-201ENST00000557194 520 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 CYCSP39-201ENST00000565821 309 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 MIR4790-201ENST00000577799 79 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 MIR2682-201ENST00000580305 110 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC012468.1-201ENST00000604888 430 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC123912.5-201ENST00000605470 343 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC107294.3-201ENST00000609211 526 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC004852.3-201ENST00000614131 326 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 MIR1302-1-201ENST00000637932 143 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 AC073544.1-201ENST00000600110 1595 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 MTND5P27-201ENST00000428871 1720 ntBASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP3Q96JB5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-562P-201ENST00000362731 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-128P-201ENST00000383976 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-214P-201ENST00000384130 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 MIR548F5-201ENST00000408421 86 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC005300.1-201ENST00000428401 373 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC005326.1-201ENST00000429197 123 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC092001.1-201ENST00000453012 261 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 snoU109.2-201ENST00000459316 135 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC091153.1-201ENST00000466297 402 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC008526.1-201ENST00000509149 338 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC074250.1-201ENST00000511117 192 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 MIR4795-201ENST00000584182 89 ntBASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK5RAP3Q96JB5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 ZNF519P1-201ENST00000449011 1626 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-37P-201ENST00000362692 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-11P-201ENST00000364234 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-7-201ENST00000364784 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNA5SP267-201ENST00000364893 126 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-8-201ENST00000365467 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 Z98749.2-208ENST00000381646 500 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-25P-201ENST00000383873 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-1-201ENST00000383898 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-48P-201ENST00000384161 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-36P-201ENST00000384172 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-4P-201ENST00000384205 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-5P-201ENST00000384238 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-3P-201ENST00000384314 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-16P-201ENST00000384385 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-15P-201ENST00000384534 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-2-201ENST00000384627 107 ntBASIC3.56□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-29P-201ENST00000384637 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms