Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 SPRR2C-201ENST00000290702 219 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RNU6-799P-201ENST00000363567 107 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RNU6-173P-201ENST00000364215 104 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RNU6-1336P-201ENST00000383886 109 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RNU6-146P-201ENST00000384602 108 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RNA5SP241-201ENST00000391326 114 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 AL031003.1-201ENST00000404229 172 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RN7SKP177-201ENST00000410567 355 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RN7SKP61-201ENST00000410642 295 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 CYCSP19-201ENST00000411715 316 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 AL356867.1-201ENST00000429623 299 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC004386.2-201ENST00000441858 148 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 IGLVIV-65-201ENST00000517313 360 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 uc_338.7-201ENST00000621834 124 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRCH3Q96II8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC138915.1-201ENST00000565427 1685 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 AL022311.1-201ENST00000623726 19416 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 RNU6-1141P-201ENST00000364520 107 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 RNU6-49P-201ENST00000384256 107 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 MIR544A-201ENST00000384855 91 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 MIR518D-201ENST00000385014 87 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 U3.30-201ENST00000391308 210 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 MLLT10P1-201ENST00000418346 262 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 AC006028.1-201ENST00000438379 402 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 AL162591.2-201ENST00000449634 317 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 AC105137.1-201ENST00000484355 562 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 AC073073.1-201ENST00000493920 463 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 AC021231.3-201ENST00000558497 370 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 AC019159.1-201ENST00000605094 187 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 MIR1245B-201ENST00000636115 69 ntBASIC5.26□□□□□ -1.57
LRCH3Q96II8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.26□□□□□ -1.57
LRCH3Q96II8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRCH3Q96II8 A2MP1-204ENST00000566278 4130 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 SNORD115-30-201ENST00000364117 82 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 AL357515.1-201ENST00000402967 542 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 SNORA77-201ENST00000408716 125 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 RNU6-554P-201ENST00000410466 106 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 YME1L1P1-201ENST00000429435 297 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 Y_RNA.649-201ENST00000459077 103 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 RNU7-141P-201ENST00000459304 62 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 RPL23AP14-201ENST00000468281 468 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 RNU6-1183P-201ENST00000517054 60 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 MIR4724-201ENST00000579485 89 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 AC008739.3-201ENST00000603262 127 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 AL359198.2-201ENST00000611836 194 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.25□□□□□ -1.57
LRCH3Q96II8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRCH3Q96II8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms