Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 AL136360.1-201ENST00000503377 1900 ntBASIC1.24□□□□□ -2.21
SMIM12Q96EX1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.24□□□□□ -2.21
SMIM12Q96EX1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 RNU6-1257P-201ENST00000384625 110 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 SNORA48.1-201ENST00000390879 135 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 CBX3P9-201ENST00000402326 552 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 RPL23AP39-201ENST00000415533 405 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 USP9YP18-201ENST00000425912 695 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 RPL7P36-201ENST00000444633 681 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AL353752.1-201ENST00000454946 260 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC093259.1-201ENST00000509755 300 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.23□□□□□ -2.21
SMIM12Q96EX1 KC877982.1-201ENST00000602313 470 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC112220.3-201ENST00000605502 502 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC116312.1-201ENST00000606841 314 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC108747.1-201ENST00000609508 535 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 AC091834.1-201ENST00000614543 472 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 MIR7974-201ENST00000615835 79 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 ZNF876P-202ENST00000398732 1485 ntBASIC1.23□□□□□ -2.21
SMIM12Q96EX1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SMIM12Q96EX1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMIM12Q96EX1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.22□□□□□ -2.21
SMIM12Q96EX1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RNU6-212P-201ENST00000362642 104 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RNU6-433P-201ENST00000363216 104 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RNU6-72P-201ENST00000384285 79 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 SNORD116-20-201ENST00000384529 92 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 MIR9-3-201ENST00000385084 90 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RNU2-23P-201ENST00000410545 195 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 Y_RNA.623-201ENST00000411128 95 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RN7SKP101-201ENST00000411376 320 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.22□□□□□ -2.21
SMIM12Q96EX1 EEF1A1P39-201ENST00000440791 250 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RPL30P6-201ENST00000475925 342 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RPS29P11-201ENST00000496507 171 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RPL38P4-201ENST00000502376 214 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AC119751.4-201ENST00000507498 357 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 RNU6-991P-201ENST00000516168 107 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AL356057.1-201ENST00000533798 831 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AC018630.3-201ENST00000542637 96 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 CR383656.8-201ENST00000549046 145 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AC023813.2-201ENST00000564321 469 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 AP001002.2-201ENST00000625137 386 ntBASIC1.22□□□□□ -2.21
SMIM12Q96EX1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 CBX3P1-201ENST00000325243 554 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RNU6-661P-201ENST00000362409 107 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RNU6-511P-201ENST00000363496 107 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 SNORA4.1-201ENST00000364263 144 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RNA5SP88-201ENST00000365560 109 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RNU6-946P-201ENST00000383878 107 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RNU6-190P-201ENST00000384154 102 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 DPH3P2-201ENST00000422618 250 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RPL7P54-201ENST00000438336 674 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 CALM1P1-201ENST00000442082 433 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 PTENP1-201ENST00000447117 1215 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 SNORA31.17-201ENST00000516953 127 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 RNU6-1092P-201ENST00000516955 87 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AP004247.1-201ENST00000531556 1289 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AL512310.1-201ENST00000548639 172 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AL355816.2-201ENST00000610049 647 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AC024940.5-201ENST00000622889 474 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 MIR1248-201ENST00000629190 106 ntBASIC1.21□□□□□ -2.22
SMIM12Q96EX1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMIM12Q96EX1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
SMIM12Q96EX1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms