Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 U1.39-201ENST00000621562 146 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 RNU6-1252P-201ENST00000363054 104 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 Z98749.2-208ENST00000381646 500 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 RNU6-1013P-201ENST00000384180 107 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 MTND4LP16-201ENST00000440828 295 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 MTND5P20-201ENST00000448677 143 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 snoU109.2-201ENST00000459316 135 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 RNU7-138P-201ENST00000459479 64 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 RNA5SP385-201ENST00000515947 110 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 RNU4-49P-201ENST00000516080 140 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 RNU6-1069P-201ENST00000516612 133 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 AC087854.1-201ENST00000519706 414 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 AC022634.1-201ENST00000520765 532 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 MIR5692C1-201ENST00000585309 91 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 SCARNA4-202ENST00000625402 129 ntBASIC3.75□□□□□ -1.81
CHMP4CQ96CF2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 U3.6-201ENST00000363622 211 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 MIR450B-201ENST00000401182 78 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 U3.37-201ENST00000408528 213 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 RNU6-1148P-201ENST00000410992 104 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC016831.2-201ENST00000417179 352 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 IFNA20P-201ENST00000436840 528 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 HMGN2P10-201ENST00000448085 265 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC233279.1-201ENST00000455300 423 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC113155.1-201ENST00000511141 769 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC046134.1-201ENST00000514454 666 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 Y_RNA.702-201ENST00000516843 96 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC009812.2-201ENST00000517657 457 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 OR1M4P-201ENST00000589199 287 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC005498.1-201ENST00000592125 465 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC078899.3-201ENST00000599065 212 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 APOOP1-201ENST00000604695 592 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 RNU6-85P-201ENST00000605989 107 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 MIR6134-201ENST00000617606 109 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC092794.2-201ENST00000620933 563 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 AC018692.3-201ENST00000623929 123 ntBASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHMP4CQ96CF2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 RNU1-105P-201ENST00000363470 161 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 RNU6-72P-201ENST00000384285 79 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 MIR767-201ENST00000390228 109 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 SNORD67-201ENST00000390833 111 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 RNU4-47P-201ENST00000410876 114 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 MTCO3P46-201ENST00000425787 232 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC006026.2-201ENST00000457376 180 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 RNU7-66P-201ENST00000459469 62 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 RPS29P2-201ENST00000479278 136 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 RN7SL283P-201ENST00000489055 303 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC008628.2-201ENST00000502605 298 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 Y_RNA.687-201ENST00000516558 91 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC021739.1-201ENST00000559631 174 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC005668.1-201ENST00000571142 476 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 UBE2V2P2-201ENST00000587677 504 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC008121.1-201ENST00000603244 268 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AL627309.6-201ENST00000606857 840 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 uc_338.25-201ENST00000613756 156 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AC022306.2-201ENST00000617563 647 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 MIR622-201ENST00000638396 96 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 AL161431.1-201ENST00000618966 4205 ntBASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHMP4CQ96CF2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 RNU6-845P-201ENST00000362578 103 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 RNU6-254P-201ENST00000363377 107 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 RNU6-831P-201ENST00000384548 107 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 RNA5SP274-201ENST00000410484 108 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 Y_RNA.604-201ENST00000410574 102 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 NIPA2P5-201ENST00000452282 464 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 HMGN1P12-201ENST00000499125 195 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms