Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC091152.3-201ENST00000604227 325 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC091304.6-201ENST00000619761 202 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 OR4G2P-201ENST00000328113 903 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 RNU6-359P-201ENST00000365466 108 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 MIR508-201ENST00000384857 115 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 MIR561-201ENST00000385216 97 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL139397.2-201ENST00000404529 772 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 MTND3P20-201ENST00000407663 186 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC097463.2-201ENST00000421074 142 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC244035.1-201ENST00000430042 390 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 MTND4P6-201ENST00000438297 472 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL161788.1-201ENST00000441805 169 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC027575.1-201ENST00000481064 460 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 RPL36AP48-201ENST00000485521 314 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC018437.1-201ENST00000492214 406 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 MTCO2P15-201ENST00000532655 656 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 BNIP3P23-201ENST00000599655 511 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC022202.1-201ENST00000613515 211 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL357080.1-201ENST00000617394 239 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC010975.3-201ENST00000618727 978 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 RNU6-223P-201ENST00000362830 107 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 SNORD114-2-201ENST00000363953 78 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 Y_RNA.274-201ENST00000364714 101 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 RNU6-952P-201ENST00000391164 108 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 BTF3L4P3-201ENST00000418879 476 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.29□□□□□ -2.2
TOPBP1Q92547 AL161651.1-201ENST00000440882 223 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 AC005410.1-202ENST00000460347 485 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 AC104806.1-201ENST00000508720 308 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 RNA5SP137-201ENST00000516833 135 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.29□□□□□ -2.2
TOPBP1Q92547 OR5AL2P-201ENST00000532185 920 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 LINC00933-203ENST00000559812 219 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.29□□□□□ -2.2
TOPBP1Q92547 AC090079.2-201ENST00000575289 768 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 AC069304.2-201ENST00000605154 435 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 AC011939.3-201ENST00000613686 466 ntBASIC1.29□□□□□ -2.2
TOPBP1Q92547 RNU6-1207P-201ENST00000384343 107 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 RNA5SP212-201ENST00000391223 107 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.28□□□□□ -2.2
TOPBP1Q92547 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.28□□□□□ -2.2
TOPBP1Q92547 Z75746.1-201ENST00000440243 2080 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 snoU109.1-201ENST00000459339 135 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 RPL31P58-201ENST00000469001 379 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 AC026414.1-201ENST00000504046 698 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 SNORA25.11-201ENST00000515935 105 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 RNA5SP165-201ENST00000517142 115 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.28□□□□□ -2.2
TOPBP1Q92547 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.28□□□□□ -2.2
TOPBP1Q92547 CYB5AP5-201ENST00000549779 389 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 AC012213.3-201ENST00000577199 777 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.28□□□□□ -2.2
TOPBP1Q92547 AC243960.4-201ENST00000600532 288 ntBASIC1.28□□□□□ -2.2
TOPBP1Q92547 RNU5B-1-201ENST00000363286 116 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 RNU6-97P-201ENST00000363387 104 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 RNU6-354P-201ENST00000383862 107 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 RNU6-610P-201ENST00000384264 107 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 RNU6-114P-201ENST00000384704 105 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 SNORD65.1-201ENST00000390889 71 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 MIR1197-201ENST00000408818 88 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 MTND1P28-201ENST00000435623 950 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 PTGES3P1-201ENST00000439531 483 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 AL441985.1-201ENST00000457727 251 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.27□□□□□ -2.21
TOPBP1Q92547 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.27□□□□□ -2.21
TOPBP1Q92547 AC004812.1-201ENST00000540773 146 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.27□□□□□ -2.21
TOPBP1Q92547 MTCYBP23-201ENST00000558717 1102 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 ROCK1P1-201ENST00000573767 549 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 MTCYBP22-201ENST00000603788 447 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 AC009237.15-201ENST00000610252 501 ntBASIC1.27□□□□□ -2.21
TOPBP1Q92547 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TOPBP1Q92547 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.27□□□□□ -2.21
TOPBP1Q92547 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.27□□□□□ -2.21
TOPBP1Q92547 RNU1-72P-201ENST00000362976 153 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 Y_RNA.234-201ENST00000364409 97 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 RNU6-432P-201ENST00000384196 109 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
TOPBP1Q92547 SNORA40.19-201ENST00000390846 128 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AL590084.2-201ENST00000401481 382 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AL158823.1-201ENST00000418441 478 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 MTND2P20-201ENST00000440805 661 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC118469.1-201ENST00000442943 488 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.26□□□□□ -2.21
TOPBP1Q92547 CYP2C59P-201ENST00000457790 269 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AP001324.2-201ENST00000461163 319 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC008628.1-201ENST00000508663 265 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms