Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 MIR3186-201ENST00000577404 85 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AL160281.1-201ENST00000605307 311 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC009229.3-201ENST00000608056 282 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 Z69720.2-201ENST00000624755 279 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 MIR490-201ENST00000384865 128 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 PGBD4P6-201ENST00000421501 610 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 TOMM20P4-201ENST00000427861 435 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AL133547.1-201ENST00000448546 220 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 HMGN2P7-201ENST00000456186 273 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 SNORD5.1-201ENST00000458800 75 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AC097473.1-201ENST00000508142 408 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.711-201ENST00000516993 102 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 MIR3158-1-201ENST00000583596 81 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 MIR4276-201ENST00000584832 70 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AP000787.2-201ENST00000604432 568 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 FTX_3.1-201ENST00000610451 147 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 AC027309.3-201ENST00000623419 351 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 U6.98-201ENST00000637157 84 ntBASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4AQ8WYN0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.473-201ENST00000384333 102 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 MIR517A-201ENST00000385001 87 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 MIR34A-201ENST00000385130 110 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC091286.1-201ENST00000431233 461 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC236972.1-201ENST00000433225 199 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 RPL7P42-201ENST00000481005 679 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC090096.1-201ENST00000489168 390 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 SNORA67.7-201ENST00000516664 135 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 SNRPGP18-201ENST00000553000 214 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC019193.3-201ENST00000609144 554 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 AC048347.1-201ENST00000624621 427 ntBASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4AQ8WYN0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATG4AQ8WYN0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
ATG4AQ8WYN0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
ATG4AQ8WYN0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.88
ATG4AQ8WYN0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-37P-201ENST00000362692 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 U3.6-201ENST00000363622 211 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-11P-201ENST00000364234 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-7-201ENST00000364784 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-8-201ENST00000365467 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-25P-201ENST00000383873 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1-201ENST00000383898 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-890P-201ENST00000384121 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-48P-201ENST00000384161 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-36P-201ENST00000384172 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-4P-201ENST00000384205 107 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms