Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RPL21P8-201ENST00000465083 535 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 RPL7P5-201ENST00000471472 736 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AC105758.1-201ENST00000506038 399 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 Y_RNA.700-201ENST00000516806 100 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 IGKV2D-23-201ENST00000518179 286 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AL133153.1-201ENST00000557756 303 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AC130289.1-201ENST00000577321 73 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AL161423.1-201ENST00000613700 262 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AC048347.1-201ENST00000624621 427 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 AL513302.2-201ENST00000562313 1842 ntBASIC4□□□□□ -1.77
SH3RF3Q8TEJ3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 MTND5P6-201ENST00000422338 1798 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 OR56A5-201ENST00000340110 738 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-960P-201ENST00000364056 120 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 SNORA23-201ENST00000365128 182 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 Y_RNA.478-201ENST00000384358 107 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 MIR128-1-201ENST00000384921 82 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 U3.19-201ENST00000390893 196 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 SNORD70.1-201ENST00000391007 85 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AC096664.2-201ENST00000411843 406 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AL606753.1-201ENST00000427435 87 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 EZH2P1-201ENST00000431167 291 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AC104332.1-201ENST00000440471 797 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 RNU7-59P-201ENST00000459101 61 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AC093767.1-201ENST00000504523 156 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 SNORA25.11-201ENST00000515935 105 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 SNORA40.14-201ENST00000516543 86 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 SCARNA13-201ENST00000516672 275 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-64P-201ENST00000517119 105 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AC040926.1-201ENST00000530195 238 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 MIR3941-201ENST00000582572 103 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 AC104763.2-201ENST00000604179 382 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 ZNF72P-201ENST00000425869 1908 ntBASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SH3RF3Q8TEJ3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RNA5SP374-201ENST00000362939 125 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-263P-201ENST00000363811 107 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 SNORD82-201ENST00000365530 70 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-278P-201ENST00000390945 109 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RPL23AP69-201ENST00000431134 458 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 FCF1P4-201ENST00000448326 183 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AL353691.1-201ENST00000451332 387 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RNU7-167P-201ENST00000459160 62 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RPL9P32-201ENST00000464118 620 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AC108860.1-201ENST00000484521 383 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 HMGB1P35-201ENST00000503360 598 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AC108078.2-201ENST00000510750 236 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 APOOP4-201ENST00000513530 597 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-255P-201ENST00000516957 105 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 MIR3133-201ENST00000583157 78 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AL160281.1-201ENST00000605307 311 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AC009570.1-201ENST00000609599 745 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 AC004792.1-201ENST00000614523 137 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 CEP170P1-201ENST00000502249 4587 ntBASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.98□□□□□ -1.77
SH3RF3Q8TEJ3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC004925.1-201ENST00000624256 2706 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 RNU1-70P-201ENST00000362618 164 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms