Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR1267-201ENST00000408723 78 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AL035410.1-201ENST00000427409 427 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 RPS15AP5-201ENST00000436276 388 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC006512.1-201ENST00000468816 291 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 Y_RNA.654-201ENST00000497848 106 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AP003034.1-201ENST00000534621 422 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC010738.1-201ENST00000604970 987 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AL138726.1-201ENST00000614873 333 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC106800.4-201ENST00000614905 153 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 Pinc.1-201ENST00000616452 154 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 RNU2-36P-201ENST00000410361 191 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 RPL36AP53-201ENST00000432891 316 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 MTND5P14-201ENST00000441481 1267 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 RAC1P7-201ENST00000445367 377 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 MTND2P24-201ENST00000453434 806 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 RNU6-488P-201ENST00000515918 99 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 SCARNA15.2-201ENST00000516409 127 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 HSPA8P13-201ENST00000523715 472 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC093027.1-201ENST00000546698 429 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AL137246.1-201ENST00000607072 977 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 uc_338.14-201ENST00000613162 166 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AL590383.1-201ENST00000428602 75 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 GTF2IP20-201ENST00000431663 360 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 AC008121.1-201ENST00000603244 268 ntBASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.18□□□□□ -2.38
ALMS1Q8TCU4 RNU5A-1-201ENST00000362698 116 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU2-7P-201ENST00000410794 178 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC092047.1-201ENST00000424997 240 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 snoU13.9-201ENST00000458927 103 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC134026.1-201ENST00000623249 2239 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 MIR101-1-201ENST00000362265 75 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6-833P-201ENST00000363486 107 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6-452P-201ENST00000384406 107 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 DSTNP4-201ENST00000399472 474 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AL589655.1-201ENST00000405398 482 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 MIR1303-201ENST00000408625 86 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RPL31P53-201ENST00000457065 348 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC093677.1-201ENST00000514414 678 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6-902P-201ENST00000517212 91 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AP001893.2-201ENST00000526949 202 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RAB11AP2-201ENST00000545905 639 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AP000403.1-201ENST00000603349 851 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AL022345.1-201ENST00000607292 135 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6-1226P-201ENST00000384317 107 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 MTATP6P31-201ENST00000406985 692 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 GTF2IP13-201ENST00000438487 386 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AC111000.5-201ENST00000506559 1178 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 SNORA3.4-201ENST00000515969 96 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6-1308P-201ENST00000516817 103 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AL669831.4-202ENST00000590817 238 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 AL589743.7-201ENST00000612637 233 ntBASIC0.17□□□□□ -2.38
ALMS1Q8TCU4 RNU6-270P-201ENST00000364131 105 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 Y_RNA.552-201ENST00000384665 112 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC097499.1-201ENST00000444277 208 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL590705.4-201ENST00000532209 134 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC105036.1-201ENST00000566222 271 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 BNIP3P23-201ENST00000599655 511 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC011155.2-201ENST00000623202 216 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 SNORA50A-201ENST00000384225 134 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 MT-TQ-201ENST00000387372 72 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 TAF9BP2-201ENST00000400856 499 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 ACA64.5-201ENST00000516207 127 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC006199.1-201ENST00000548728 219 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 HMGN2P15-201ENST00000585707 270 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AP000238.1-201ENST00000608759 426 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 RNA5SP361-201ENST00000362686 118 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms