Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORD74.4-201ENST00000364129 80 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-512P-201ENST00000364438 103 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-514P-201ENST00000384208 107 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 MIR1179-201ENST00000408703 91 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC008267.6-201ENST00000441664 139 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC007395.1-201ENST00000451333 677 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 SSXP4-201ENST00000451349 245 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC087588.1-201ENST00000462203 316 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AL160314.1-201ENST00000490836 438 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 GMPSP1-201ENST00000514075 579 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-143P-201ENST00000516942 93 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AK6P2-201ENST00000549020 471 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 LINC00901.1-201ENST00000617252 152 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AL360181.4-201ENST00000621752 134 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AL451142.2-201ENST00000429076 2090 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC009229.4-201ENST00000623854 1947 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-428P-201ENST00000362942 107 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-153P-201ENST00000364422 104 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 SNORD14B-201ENST00000364533 90 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.273-201ENST00000364703 102 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-449P-201ENST00000383914 107 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.446-201ENST00000384178 104 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 SNORA36C-201ENST00000384289 132 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-21P-201ENST00000384710 107 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU5A-5P-201ENST00000411054 116 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 OOSP1P1-201ENST00000423265 274 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AC016700.2-201ENST00000446011 156 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 RNU5F-8P-201ENST00000515941 111 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 ATP5F1P5-201ENST00000526403 760 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AC005476.1-201ENST00000554427 397 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AL606490.9-201ENST00000603331 271 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AC099669.2-201ENST00000616549 437 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 MIR6500-201ENST00000622700 86 ntBASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SHKBP1Q8TBC3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC100821.1-201ENST00000523153 2479 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 MIR410-201ENST00000362222 80 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 RNU5A-1-201ENST00000362698 116 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.215-201ENST00000364204 112 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 RPS4XP3-201ENST00000398541 413 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-712P-201ENST00000410558 100 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 HSPE1P12-201ENST00000412576 301 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AL158156.1-201ENST00000422509 473 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC069285.2-201ENST00000440210 275 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC006011.1-201ENST00000442758 349 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 UQCRBP2-201ENST00000447827 297 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 snoU13.30-201ENST00000458951 104 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC073901.1-201ENST00000462471 408 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 RNU7-110P-201ENST00000516891 62 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC084851.1-201ENST00000529105 249 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC010928.2-201ENST00000588017 287 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC008121.1-201ENST00000603244 268 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC107294.1-201ENST00000609524 467 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC099506.2-201ENST00000623074 221 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 AC090617.7-201ENST00000623952 126 ntBASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHKBP1Q8TBC3 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms