Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC138393.1-203ENST00000327086 343 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MIR412-201ENST00000362142 91 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 SNORA38.1-201ENST00000364172 131 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RNA5SP72-201ENST00000364442 117 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RNU4-66P-201ENST00000365199 138 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 U8.8-201ENST00000365399 135 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RNA5SP219-201ENST00000390940 113 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RNU4-46P-201ENST00000410818 138 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RNU6-387P-201ENST00000411331 105 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RPS12P2-201ENST00000439728 269 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 GZMAP1-201ENST00000503054 631 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC008716.1-201ENST00000511084 513 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MIR892C-201ENST00000516410 77 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RNA5SP367-201ENST00000516557 118 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 ACA59.2-201ENST00000517061 156 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RN7SKP40-201ENST00000517211 242 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MTND1P35-201ENST00000526739 508 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 OR5BN1P-201ENST00000532955 829 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 HMGB1P33-201ENST00000563485 527 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MIR5692A1-201ENST00000580523 69 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MIR5194-201ENST00000582634 120 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC005498.1-201ENST00000592125 465 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AP001486.3-201ENST00000615334 372 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 uc_338.34-201ENST00000617467 174 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MIR6134-201ENST00000617606 109 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 YWHAEP7-203ENST00000622054 312 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 ZNF519P1-201ENST00000449011 1626 ntBASIC2.24□□□□□ -2.05
BEST4Q8NFU0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.24□□□□□ -2.05
BEST4Q8NFU0 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 MIR422A-201ENST00000362286 90 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 Y_RNA.126-201ENST00000363382 111 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 RNU6-1322P-201ENST00000364309 107 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 RNU2-29P-201ENST00000410423 189 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 Y_RNA.619-201ENST00000410951 90 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AL353621.1-201ENST00000418219 243 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 NUP35P1-201ENST00000422734 947 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 MTCO1P20-201ENST00000425366 358 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 MTND1P4-201ENST00000435196 415 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 PRSS3P4-201ENST00000453323 162 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC107626.1-201ENST00000471084 183 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC083798.1-201ENST00000472671 131 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC074344.1-201ENST00000512823 224 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC105417.1-201ENST00000514691 285 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 CKS1BP7-201ENST00000522230 235 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 NACAP3-201ENST00000552100 481 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 MIR5092-201ENST00000583139 88 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 MIR3158-1-201ENST00000583596 81 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 AC010525.2-201ENST00000590920 195 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
BEST4Q8NFU0 MTND4P14-201ENST00000435799 1354 ntBASIC2.23□□□□□ -2.05
BEST4Q8NFU0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 RNU6-72P-201ENST00000384285 79 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 RNU6-19P-201ENST00000384718 107 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AL138885.1-201ENST00000405921 675 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 BTF3P7-201ENST00000407097 488 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 HMGB1P9-201ENST00000429856 646 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AL627311.1-201ENST00000431514 115 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 HMGB1P31-201ENST00000437242 427 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 MTND3P16-201ENST00000452205 344 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AL672167.3-201ENST00000465951 960 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 DYNLL1P5-201ENST00000467158 270 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 MTCO3P38-201ENST00000468910 766 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 MRPL42P6-201ENST00000486397 371 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms